HOMEWORK 6

1. Please find the gene for the lipid transfer protein that you showed the structures in homework 5.

H.vulgare Ltp1 gene for lipid transfer protein GenBank Report

2. How many sequences of DNA and Protein have been known for barley?
    DNA: 2205
    Protein: 1959

3. How many BLAST hits you can get if you use the gene you found for this protein as the query sequence to search against non-redundant GenBank + EMBL + DDBJ + PDB sequence database? Please also show 10 sequences that produce significant alignments.

   1. Distribution of 60 Blast Hits on the Query Sequence
   2.
emb|X60292|HVLTP1G  Hordeum vulgare gene for LTP 1
emb|X59253|HVLTP1  H.vulgare rearranged Ltp1 gene for lipid ...
emb|X05168|TAMYR1  Barley mRNA for put. amylase or protease ...
emb|Y14573.1|HVCH4H  Hordeum vulgare DNA for chromosome
emb|X63669|TDLTPAA  T.durum mRNA for lipid transfer protein
emb|X71667|SVLTP1  S.vulgare ltp1 gene
emb|Z23271|OSLPTPRA  O.sativa lipid transfer protein gene, c...
emb|X83435|OSLTPA15  O.sativa mRNA for lipid transfer protei...
emb|X71669|SVTLP1R  S.vulgare ltp1 mRNA
gb|AF017359.1|AF017359  Oryza sativa lipid transfer protein ...