Enzymatic cleavage of test


      1   *   10    *   20    *   30    *   40    *   50
    1 MLECNELIPLFYETCPAGENICYEMFMVATPKVPCERGCIDVCPESSLIV
   51 KYVCCNTDRCQ


Cleavage at residues:

K/
R/



Average mass


  Fragment    Residues                  Mass     B&B
   1        1  -    32   -/M...K/V   3701.41  -265
 1 -  2     1  -    37   -/M...R/G   4286.11  -212
 1 -  3     1  -    51   -/M...K/Y   5730.85  -198
 1 -  4     1  -    59   -/M...R/C   6685.93  -154
 1 -  5     1  -    61   -/M...Q/-   6917.21  -127
   2       33  -    37   K/V...R/G    602.71   128
 2 -  3    33  -    51   K/V...K/Y   2047.45   -85
 2 -  4    33  -    59   K/V...R/C   3002.53   -22
 2 -  5    33  -    61   K/V...Q/-   3233.81    24
   3       38  -    51   R/G...K/Y   1462.75  -162
 3 -  4    38  -    59   R/G...R/C   2417.84   -56
 3 -  5    38  -    61   R/G...Q/-   2649.11     3
   4       52  -    59   K/Y...R/C    973.10   127
 4 -  5    52  -    61   K/Y...Q/-   1204.37   235
   5       60  -    61    R/CQ/-      249.29   665


Sorted according to mass

  Fragment    Residues                  Mass     B&B
   5       60  -    61    R/CQ/-      249.29   665
   2       33  -    37   K/V...R/G    602.71   128
   4       52  -    59   K/Y...R/C    973.10   127
 4 -  5    52  -    61   K/Y...Q/-   1204.37   235
   3       38  -    51   R/G...K/Y   1462.75  -162
 2 -  3    33  -    51   K/V...K/Y   2047.45   -85
 3 -  4    38  -    59   R/G...R/C   2417.84   -56
 3 -  5    38  -    61   R/G...Q/-   2649.11     3
 2 -  4    33  -    59   K/V...R/C   3002.53   -22
 2 -  5    33  -    61   K/V...Q/-   3233.81    24
   1        1  -    32   -/M...K/V   3701.41  -265
 1 -  2     1  -    37   -/M...R/G   4286.11  -212
 1 -  3     1  -    51   -/M...K/Y   5730.85  -198
 1 -  4     1  -    59   -/M...R/C   6685.93  -154
 1 -  5     1  -    61   -/M...Q/-   6917.21  -127

PROWL

David Fenyö, fenyod@rockvax.rockefeller.edu