Database: Non-redundant GenBank+EMBL+DDBJ+PDB sequences
276,589 sequences; 407,387,334 total letters.
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
emb|X62395|NTLTP1 N.tabacum ltp1 gene for lipid transf... 2976 2.1e-243 2
gb|U66465|LPU66465 Lycopersicon pennellii lipid transfe... 1001 6.9e-74 1
gb|U66466|LPU66466 Lycopersicon pennellii lipid transfe... 990 6.0e-73 1
emb|X56040|LETSW12 L.esculentum TSW12 mRNA 975 3.7e-72 1
dbj|D13952|TOBLTP Nicotiana tabacum mRNA for lipid tra... 966 2.1e-71 1
gb|M58635|SPILTP Spinacia oleracea lipid transfer pro... 464 1.4e-28 1
gb|U15153|GHU15153 Gossypium hirsutum nonspecific lipid... 334 6.4e-25 2
gb|S78173|S78173 LTP=lipid transfer protein {clone GH... 334 6.8e-25 2
emb|X92648|HALTP H.annuus mRNA for non-specific lipid... 333 1.8e-24 2
emb|X96714|PALTP1 P.amygdalus mRNA for lipid transfer ... 297 2.1e-24 2
emb|X96715|PALTP2 P.amygdalus mRNA for lipid transfer ... 351 2.5e-22 2
emb|X92748|BVIWF1 B.vulgaris mRNA for IWF1' 382 1.3e-21 1
gb|M64746|DAREP2LTP Daucus carota lipid transfer protein... 360 9.6e-20 1
gb|I18358|I18358 Sequence 13 from patent US 5495070 /... 326 5.1e-17 1
gb|L14770|PPXEPISPEC Pachyphytum sp. epidermis-specific t... 321 1.7e-16 1
gb|L33906|BNALTPWC Brassica oleracea lipid transfer pro... 307 3.4e-15 1
gb|L29767|BNALTP Broccoli lipid transfer protein mRNA... 296 2.2e-14 1
gb|U22175|BNU22175 Brassica napus germination-specific ... 296 2.2e-14 1
gb|L33905|BNALTPWB Brassica oleracea lipid transfer pro... 280 5.8e-13 1
gb|U22105|BNU22105 Brassica napus germination-specific ... 276 1.0e-12 1
emb|Z31588|GHLITRPR G.hybrida (Regina) mRNA for lipid tr... 261 1.9e-11 1
gb|U22174|BNU22174 Brassica napus germination-specific ... 258 3.5e-11 1
emb|X96716|PALTP3 P.amygdalus mRNA for lipid transfer ... 222 3.8e-08 1
gb|M80567|ATHSEQB A.thaliana non-specific lipid transf... 220 6.4e-08 1
gb|L31938|BRRBIF38 Brassica rapa (bif38) mRNA, complete... 191 1.5e-05 1
emb|X60318|BNE2 B.napus mRNA, homologous to phosphol... 191 1.5e-05 1
dbj|D10955|RIC323PTP Rice mRNA for Phospholipid transfer ... 160 0.0054 1
gb|U29176|OSU29176 Oryza sativa lipid transfer protein ... 160 0.0058 1
gb|I18349|I18349 Sequence 4 from patent US 5495070 /g... 149 0.051 1
emb|Z31590|CER01H10 Caenorhabditis elegans cosmid R01H10 158 0.056 2
emb|X83433|OSLTPB21 O.sativa mRNA for lipid transfer pro... 142 0.18 1
emb|Z37114|HVLTPPA H.vulgare (clone pKG2316) mRNA for l... 141 0.22 1
emb|X68655|HVCW18 H.vulgare Cw-18 mRNA 132 0.76 1
gb|U67505|MJU67505 Methanococcus jannaschii from bases ... 130 0.90 1
gb|M31122|HSVSPOLGBP Herpesvirus saimiri major DNA bindin... 128 0.97 1
gb|L40608|PFAVAR1A Plasmodium falciparum (strain Dd2) v... 127 0.98 1
emb|Z34517|LBC2COSS Lactococcal bacteriophage c2 DNA cos... 124 0.997 1
gb|U67570|MJU67570 Methanococcus jannaschii from bases ... 126 0.997 2
emb|Z81558|CEF59D12 Caenorhabditis elegans cosmid F59D12 125 0.998 1
emb|Z81459|CEC03H12 Caenorhabditis elegans cosmid C03H12 125 0.998 1
gb|L37091|C2PORF Bacteriophage c2 (from Lactococcus l... 124 0.9991 1
gb|L48605|C2PVCG Bacteriophage c2 complete genome. 124 0.9993 1
emb|X62395|NTLTP1 N.tabacum ltp1 gene for lipid transferase
Length = 2075
Plus Strand HSPs:
Score = 2976 (822.3 bits), Expect = 2.1e-243, Sum P(2) = 2.1e-243
Identities = 598/605 (98%), Positives = 598/605 (98%), Strand = Plus / Plus
Query: 1 AATTAATTCTCTCAATCAAATCCAATTTTCTCCCTATAAAAACCCTAAGGTCCTATAGTG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 AATTAATTCTCTCAATCAAATCCAATTTTCTCCCTATAAAAACCCTAAGGTCCTATAGTG 200
Query: 61 TTCTATATCCAACACTAGCTCCTACTCCCTAAAGCATTTATTATATCTTCCCCTAGCTAG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 TTCTATATCCAACACTAGCTCCTACTCCCTAAAGCATTTATTATATCTTCCCCTAGCTAG 260
Query: 121 ATACTTCATTCCACAAATAGTTTGCAGCTTTTTCTTTTCCTCTAAAACAATGGAAATAGC 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ATACTTCATTCCACAAATAGTTTGCAGCTTTTTCTTTTCCTCTAAAACAATGGAAATAGC 320
Query: 181 TGGGAAAATTGCATGCTTTGTGGTATTGTGCATGGTGGTAGCTGCACCCTGCGCAGAAGC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 TGGGAAAATTGCATGCTTTGTGGTATTGTGCATGGTGGTAGCTGCACCCTGCGCAGAAGC 380
Query: 241 CATAACCTGTGGCCAGGTTACGTCGAATTTGGCACCTTGTCTTGCTTATCTTAGAAACAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 CATAACCTGTGGCCAGGTTACGTCGAATTTGGCACCTTGTCTTGCTTATCTTAGAAACAC 440
Query: 301 GGGGCCTCTGGGACGTTGTTGCGGTGGCGTTAAGGCTCTGGTGAATTCTGCAAGGACCAC 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 GGGGCCTCTGGGACGTTGTTGCGGTGGCGTTAAGGCTCTGGTGAATTCTGCAAGGACCAC 500
Query: 361 AGAAGATCGTCAAATTGCATGCACTTGCCTGAAATCAGCTGCAGGTGCTATTTCTGGAAT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 AGAAGATCGTCAAATTGCATGCACTTGCCTGAAATCAGCTGCAGGTGCTATTTCTGGAAT 560
Query: 421 CAATTTGGGCAAAGCTGCTGGTCTCCCTAGTACTTGTGGTGTCAATATTCCTTACAAGAT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 CAATTTGGGCAAAGCTGCTGGTCTCCCTAGTACTTGTGGTGTCAATATTCCTTACAAGAT 620
Query: 481 CAGCCCTTCCACTGACTGCTCCAAGTACCTCACNNNNNNNCTCTCTCATGCTATTCTTAT 540
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 CAGCCCTTCCACTGACTGCTCCAAGTACCTCACTTTTTTTCTCTCTCATGCTATTCTTAT 680
Query: 541 CCTTATATTCTATCTGCTTCATTTTCGCTTATCTTTTAAATTTTTTATTCGGAATCTTTA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 CCTTATATTCTATCTGCTTCATTTTCGCTTATCTTTTAAATTTTTTATTCGGAATCTTTA 740
Query: 601 TACCA 605
|||||
Sbjct: 741 TACCA 745
Score = 91 (25.1 bits), Expect = 2.1e-243, Sum P(2) = 2.1e-243
Identities = 23/29 (79%), Positives = 23/29 (79%), Strand = Plus / Plus
Query: 570 TATCTTTTAAATTTTTTATTCGGAATCTT 598
||||||||||| ||||| | | |||||
Sbjct: 1861 TATCTTTTAAACTTTTTTTCTGCTATCTT 1889