Homework 7

Answer to Question 1


    • A S T G L A S G L R S R P P P E A S S L T T Met D P R K V S E L R A F V K Met C R Q D P S V L H T E E Met R F L R E W V E S Met G G K V P P A T H K A K S E E N T K E E K R D K T T E D N I K T E E P S S E E S D L E I D N E G V I E A D T D A P Q E Met G D E N A E I T E A Met Met D E A N E K K G A A I D A L N D G E L Q K A I D L F T D A I K L N P R L A I L Y A K R A S V F V K L Q K P N A A I R D C D R A I E I N P D S A Q P Y K W R G K A H R L L G H W E E A A R D L A L A C K L D Y D E D A S A Met L R E V Q P R A Q K I A E H R R K Y E R K R E E R E I K E R I E R V K K A R E E H E K A Q R E E E A R R Q S G S Q F G S F P G G F P G G Met P G N F P G G Met P G Met G G A Met P G Met A G Met P G L N E I L S D P E V L A A Met Q D P E V Met V A F Q D V A Q N P S N Met S K Y Q N N P K V Met N L I S K L S A K F G G H S Stop C Q S P C Stop Met K N S L A H L L D V A I I Q T S V P L T S P E S W G A S K I I P T L C I I C G Stop G I L Q W F A I R V F I Q I Met F S Y Stop E L Q T Stop N I F Q P Stop T Y F L K I Stop G Met S I P T F F V T N L F G F F L L N Y W A R K V N V D D L L L S Stop Met K Stop R F V S G K Q I K H I Stop V D Stop V G H T V T A T S Stop I V F N V L L H N D L F Q Stop I F W D H Q K K K K K K K

    • sp|P50503|HIP_RAT (HIP) HSC70-INTERACTING PROTEIN.

    • Total number of negatively charged residues (Asp + Glu): 69
      Total number of positively charged residues (Arg + Lys): 56

    •     [1] PDOC00001 PS00001 ASN_GLYCOSYLATION
            N-glycosylation site
      
                       343-346 NMSK                                                        
      
          [2] PDOC00004 PS00004 CAMP_PHOSPHO_SITE
            cAMP- and cGMP-dependent protein kinase phosphorylation site
      
            Number of matches: 3
                  1        4-7 RKVS                                                        
                  2    152-155 KRAS                                                        
                  3    270-273 RRQS                                                        
      
          [3] PDOC00005 PS00005 PKC_PHOSPHO_SITE
            Protein kinase C phosphorylation site
      
            Number of matches: 2
                  1      46-48 THK                                                         
                  2    361-363 SAK                                                         
      
          [4] PDOC00006 PS00006 CK2_PHOSPHO_SITE
            Casein kinase II phosphorylation site
       
            Number of matches: 5
                  1      55-58 TKEE                                                        
                  2      63-66 TTED                                                        
                  3      74-77 SSEE                                                        
                  4      78-81 SDLE                                                        
                5    317-320 SDPE                                                        
      
          [5] PDOC00008 PS00008 MYRISTYL
            N-myristoylation site
      
            Number of matches: 10
                  1      86-91 GVIEAD                                                      
                  2    274-279 GSQFGS                                                      
                  3    278-283 GSFPGG                                                      
                  4    282-287 GGFPGG                                                      
                  5    286-291 GGMPGN                                                      
                  6    287-292 GMPGNF                                                      
                  7    290-295 GNFPGG                                                      
                  8    294-299 GGMPGM                                                      
                  9    298-303 GMGGAM                                                      
                 10    301-306 GAMPGM