ANSWER:
LOCUS:
NTLTP1 3112 bp DNA
PLN 18-NOV-1996
DEFINITION: N.tabacum
ltp1 gene for lipid transferase.
ACCESSION: X62395
NID:
g1679608
KEYWORDS: lipid
transferase; Ltp1 gene; non-specific lipid transferase.
SOURCE:
common tobacco.
ORGANISM: Nicotiana
tabacum
Eukaryotae; mitochondrial eukaryotes; Viridiplantae;Charophyta/Embryophyta
group;
Embryophyta; Magnoliophyta;Magnoliopsida; Solananae; Solanales; Solanaceae;
Nicotiana.
REFERENCE 1 (bases
1 to 3112)
AUTHORS: Kuhlemeier,C.
TITLE:
Direct Submission
JOURNAL: Submitted
(19-DEC-1991) C. Kuhlemeier, Institute of Plant
Physiology, Altenbergrain 21, Ch-3013 Bern, SWITZERLAND
REMARK:
Revised by [3]
REFERENCE 2 (bases
1038 to 3112)
AUTHORS: Fleming,A.J.,
Mandel,T., Hofmann,S., Sterk,P., de Vries,S.C. and
Kuhlemeier,C.
TITLE:
Expression pattern of a tobacco lipid transfer protein gene within
the shoot apex
JOURNAL: Plant
J. 2 (6), 855-862 (1992)
MEDLINE: 93258425
REFERENCE 3 (bases
1 to 3112)
AUTHORS: Caderas,D.
TITLE:
Direct Submission
JOURNAL: Submitted
(18-NOV-1996) D. Caderas, Institute of Plant Physiology,
University of Berne, Altenbergrain 21, CH-3013 Berne, SWITZERLAND
REFERENCE 4 (bases
1 to 3112)
AUTHORS: Canevascini,S.,
Caderas,D., Mandel,T., Fleming,A.J., Dupuis,I. and
Kuhlemeier,C.
TITLE:
Tissue-specific expression and promoter analysis of the tobacco
Itp1 gene
JOURNAL: Plant
Physiol. 112 (2), 513-524 (1996)
MEDLINE: 97037728
FEATURES:
Location/Qualifiers
source
1..3112
/organism="Nicotiana tabacum"
/cultivar="Samsun"
/db_xref="taxon:4097"
/dev_stage="leaf"
/clone_lib="lambda EMBL3"
sig_peptide
1347..1415
/gene="Ltp1"
CDS
join(1347..1681,2662..2671)
/gene="Ltp1"
/codon_start=1
/product="lipid transferase"
/db_xref="PID:g19883"
/translation="MEIAGKIACFVVLCMVVAAPCAEAITCGQVTSNLAPCLAYLRNT
GPLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPY
KISPSTDCSKVQ"
prim_transcript
<1347..>2671
/gene="Ltp1"
exon
<1347..1681
/gene="Ltp1"
/number=1
gene
1347..2671
/gene="Ltp1"
mat_peptide
join(1416..1681,2662,1680..1681,2662..2668)
/gene="Ltp1"
/product="lipid transferase"
intron
1682..2661
/gene="Ltp1"
/number=1
exon
2662..>2671
/gene="Ltp1"
/number=2
BASE COUNT
1009 a 533 c 510 g 1060
t
PROTEIN SEQUENCE:
1 meiagkiacf vvlcmvvaap caeaitcgqv tsnlapclay lrntgplgrc cggvkalvns
61 arttedrqia ctclksaaga isginlgkaa glpstcgvni pykispstdc skvq
2. How many nucleotide and protein
sequence of Lycopersiconesculentum were know?
Please find
its class II small heat shock protein mRNA,complete cds.
ANSWER:
Lycopersicon esculentum
Known sequence: 855 nucleotide
;1104 protein.(untill 1997.12.9)
LOCUS
LEU72396 738 bp mRNA
PLN 14-JAN-1997
DEFINITION Lycopersicon esculentum
class II small heat shock protein
Le-HSP17.6 mRNA, complete cds.
ACCESSION U72396
NID
g1773290
KEYWORDS .
SOURCE
tomato.
ORGANISM Lycopersicon
esculentum
Eukaryotae; mitochondrial eukaryotes; Viridiplantae;
Charophyta/Embryophyta group; Embryophyta; Magnoliophyta;
Magnoliopsida; Solananae; Solanales; Solanaceae; Solanum clade;
Lycopersicon.
REFERENCE 1 (bases
1 to 738)
AUTHORS Kadyrzhanova,D.K.,
Vlachonasios,K.E., Ververidis,P. and Dilley,D.R.
TITLE
A heat-treatment chilling tolerance related cDNA from tomato fruit
encoding a small heat-shock protein class II
JOURNAL Unpublished
(1996)
REFERENCE 2 (bases
1 to 738)
AUTHORS Kadyrzhanova,D.K.,
Vlachonasios,K.E., Ververidis,P. and Dilley,D.R.
TITLE
Direct Submission
JOURNAL Submitted
(24-SEP-1996) Horticulture, Michigan State University,
Plant and Soil Science Building, East Lansing, MI 48824-1325, USA
FEATURES
Location/Qualifiers
source
1..738
/organism="Lycopersicon esculentum"
/cultivar="Mountain Springs"
/db_xref="taxon:4081"
/clone_lib="tomato heat-shock/chilling tolerance lambda
gt11 library of D.R. Dilley"
/dev_stage="mature green fruit"
/tissue_type="pericarp"
/clone="pHCT1"
CDS
108..584
/note="heat treatment/chilling tolerance related protein
from tomato fruit"
/codon_start=1
/product="class II small heat shock protein Le-HSP17.6"
/db_xref="PID:g1773291"
/translation="MDLRLLGIDNTPLFHTLHHMMEAAGEDSDKSVNAPSRNYVRDAK
AMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFI
RMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKVA"
polyA_signal
629..634
BASE COUNT
229 a 117 c 183 g
209 t