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1. Please find the gene for the lipid transfer protein that you showed the structures in homework 5.

HVLtp1 gene from Hordeum vulgare. GenBank report
2. How many sequences of DNA and Protein have been known for barley?
Nucleotide (1719)¡@ and¡@ protein (1459) for Hordeum vulgare.
3. How many BLAST hits you can get if you use the gene you found for¡@ this protein as the query
¡@¡@¡@ sequence to search against non-redundant GenBank + EMBL + DDBJ + PDB sequence database?
¡@¡@ Please also show 10 sequences that produce significant alignments ( you just need to show
¡@¡@ their names and ID numbers ).
There are 47 BLAST hits.
Top 10 sequences :
¡@¡@¡@ emb|X59253|HVLTP1¡@¡@¡@¡@ H.vulgare Ltp1 gene

¡@¡@¡@ emb|X60292|HVLTP1G¡@¡@¡@¡@¡@ Hordeum vulgare LTP1 gene
¡@¡@¡@ emb|X05168|TAMYR1¡@¡@¡@¡@¡@ Barley mRNA for put. amylase or protease
¡@¡@¡@ emb|X63669|TDLTPAA¡@¡@¡@¡@¡@ T.durum mRNA for lipid transfer protein
¡@¡@¡@ emb|X71667|SVLTP1¡@¡@¡@¡@¡@¡@ S.vulgare ltp1 gene
¡@¡@¡@ emb|Z23271|OSLPTPRA¡@¡@¡@ O .sativa lipid transfer protein gene
¡@¡@¡@ emb|X83435|OSLTPA15¡@¡@¡@¡@ O.sativa mRNA for lipid transfer protein
¡@¡@¡@ emb|X71669|SVTLP1R¡@¡@¡@¡@¡@ S.vulgare ltp1 mRNA
¡@¡@¡@ gb|AF017359.1|AF017359¡@¡@¡@ Oryza sativa lipid transfer protein
¡@¡@¡@ emb|X83434|OSLTPB1¡@¡@¡@¡@¡@ O.sativa mRNA for lipid transfer protein

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¡@ 12/7/1999
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