ProtParam tool
User-provided sequence:
1 11 21 31 41 51
| | | | | |
1 ATGAAATCTG ACTTCTACTT CCAGAAATCA GAGCCTCATT CCCTTAGTAG TGAAGCATTG 60
61 ATGAGGAGAG CAGTGTCTTT GGTAACAGAT AGCACCTCTA CCTTTCTCTC TCAGACCACA 120
121 TATGCGTTGA TTGAAGCTAT TACTGAATAT ACTAAGGCTG TTTATACCTT AACTTCTCTT 180
181 TACCGACAAT ATACAAGTTT ACTTGGGAAA ATGAATTCAG AGGAGGAAGA TGAAGTGTGG 240
241 CAGGTGATCA TAGGAGCCAG AGCTGAGATG ACTTCAAAAC ACCAAGAGTA CTTGAAGCTG 300
301 GAAACCACTT GGATGACTGC AGTTGGTCTT TCAGAGATGG CAGCAGAAGC TGCATATCAA 360
361 ACTGGCGCAG ATCAGGCCTC TATAACCGCC AGGAATCACA TTCAGCTGGT GAAACTGCAG 420
421 GTGGAAGAGG TGCACCAGCT CTCCCGGAAA GCAGAAACCA AGCTGGCAGA AGCACAGATA 480
481 GAAGAGCTCC GTCAGAAAAC ACAGGAGGAA GGGGAGGAGC GGGCTGAGTC GGAGCAGGAG 540
541 GCCTACCTGC GTGAGGATTG A
References and documentation are available.
Number of amino acids: 561
Molecular weight: 45305.5
Theoretical pI: 5.19
Amino acid composition:
Ala (A) 173 30.8%
Arg (R) 0 0.0%
Asn (N) 0 0.0%
Asp (D) 0 0.0%
Cys (C) 117 20.9%
Gln (Q) 0 0.0%
Glu (E) 0 0.0%
Gly (G) 147 26.2%
His (H) 0 0.0%
Ile (I) 0 0.0%
Leu (L) 0 0.0%
Lys (K) 0 0.0%
Met (M) 0 0.0%
Phe (F) 0 0.0%
Pro (P) 0 0.0%
Ser (S) 0 0.0%
Thr (T) 124 22.1%
Trp (W) 0 0.0%
Tyr (Y) 0 0.0%
Val (V) 0 0.0%
Asx (B) 0 0.0%
Glx (Z) 0 0.0%
Xaa (X) 0 0.0%
Total number of negatively charged residues (Asp + Glu): 0
Total number of positively charged residues (Arg + Lys): 0
Atomic composition:
Carbon C 1660
Hydrogen H 2761
Nitrogen N 561
Oxygen O 686
Sulfur S 117
Formula: C1660H2761N561O686S117
Total number of atoms: 5785
Extinction coefficients:
Conditions: 6.0 M guanidium hydrochloride
0.02 M phosphate buffer
pH 6.5
Extinction coefficients are in units of M-1 cm-1 .
The first table lists values computed assuming ALL Cys
residues appear as half cystines, whereas the second table
assumes that NONE do.
276 278 279 280 282
nm nm nm nm nm
Ext. coefficient 8410 7366 6960 6960 6960
Abs 0.1% (=1 g/l) 0.186 0.163 0.154 0.154 0.154
276 278 279 280 282
nm nm nm nm nm
Ext. coefficient 0 0 0 0 0
Abs 0.1% (=1 g/l) 0.000 0.000 0.000 0.000 0.000
Estimated half-life:
The N-terminal of the sequence considered is A (Ala).
The estimated half-life is: 4.4 hours (mammalian reticulocytes, in vitro).
>20 hours (yeast, in vivo).
>10 hours (Escherichia coli, in vivo).
Instability index:
The instability index (II) is computed to be 49.44
This classifies the protein as unstable.
Aliphatic index: 30.84
Grand average of hydropathicity (GRAVY): 0.817