Search genes associated with colon cancer in human genome.
MLH1 was identified
as a locus frequently mutated in hereditary nonpolyposis colon cancer
(HNPCC). When cloned, it was discovered to be a human homolog of the E.
coli mismatch repair gene mutS.
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How many hits will you get if you search genes associated
with colon cancer in human genome?
Ans. 17 hits
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How many loci will you find if you search locus link
for human in Genebank?
Ans. 21 loci
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Give the locus ID and position of MLH1.
Ans. ID : 4292
position : 3p21.3
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Find the %ID of nucleotide sequence for its possible
orthologs in mouse.
Ans. Human MLH1 v.s Mouse Hmga1 %ID=90.5
Human MLH1 v.s Mouse Mlh1 %ID=89.3
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Find the total number of mutations of MLH1 reported
in human gene mutation database.
Ans. 147
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Give the DNA sequence of E. coli mismatch repair gene
mutS.
Ans. mutS
sequence
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