Commencing search, please wait for results.
BLASTN 2.0.4 [Feb-24-1998]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A.
Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman
(1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(336 letters)
Database: Non-redundant GenBank+EMBL+DDBJ+PDB sequences
343,210 sequences; 711,246,576 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|M29255|ECOTOXHS E.coli heat-stable toxin (st) gene, complete... 355 2e-96
gb|J03311|ECOSTET E. coli estA4 gene encoding a methanol solubl... 341 4e-92
gb|M34916|ECOHSEST E.coli heat-stable enterotoxin gene, complet... 341 4e-92
gb|M18346|ECOESTA3A E.coli estA3 gene encoding heat-stable ente... 246 2e-63
gb|M18345|ECOESTA2A E.coli estA2 gene encoding heat-stable ente... 228 4e-58
gb|M58746|ECOESTA1 E.coli toxin I (estA1) gene, complete cds.O 44 0.012
gb|M25607|ECOSTI E.coli heat-stable enterotoxin I gene, complet... 44 0.012
emb|V00612|ISTN16 Transposon Tn1681 (which codes for a heat-sta... 44 0.012
gb|U28729|CELR153 Caenorhabditis elegans cosmid R153 42 0.047
gb|U58751|CELC07G1 Caenorhabditis elegans cosmid C07G1. 42 0.047
emb|Z97056|HS434P1 Human DNA sequence from PAC 434P1 on chromos... 42 0.047
gb|AE000659|HUAE000659 Homo sapiens T-cell receptor alpha delta... 40 0.18
gb|U28739|CELC17G10 Caenorhabditis elegans cosmid C17G10 40 0.18
emb|Z98849|SPAC17A5 S.pombe chromosome I cosmid c17A5 40 0.18
emb|X60106|ECCSVR E.coli csvR gene 38 0.73
dbj|D63844|SYNAPG3E Cloning vector pKF16k DNA, complete sequence 38 0.73
emb|Z72004|HSJ256K2A Human DNA sequence from cosmid J256K24, be... 38 0.73
gb|M65202|RTSTSG Plasmid Rst1 Tsg fragment ORF-I, and kanamycin... 38 0.73
gb|M19415|SYNHSG299 Synthetic plasimd pHSG299 DNA. 38 0.73
gb|U25270|CVACYCNMT Expression cloning vector pACYC177/ET3d/yNM... 38 0.73
emb|X06402|PACYC177 Cloning vector pACYC177 38 0.73
gb|U34318|XXU34318 E.coli/Kluyveromyces lactis shuttle vector p... 38 0.73
emb|AJ000058|ATAJ0058 Arabidopsis thaliana mRNA for MCM3 homolog 38 0.73
gb|M36415|SYNPFXBLUE Synthetic E.coli pfxblue gene, complete cds. 38 0.73
gb|M11420|TRN26IS Transposon Tn2680 insertion site for insertio... 38 0.73
dbj|D63845|SYNAPG3F Cloning vector pKF17k DNA, complete sequence 38 0.73
gb|AF061921|AF061921 Plasposon pTnMod-OKm, complete sequence 38 0.73
dbj|D63841|SYNAPG3B Cloning vector pKF297 DNA, complete sequence 38 0.73
dbj|D63840|SYNAPG3A Cloning vector pKF296 DNA, complete sequence 38 0.73
emb|X84307|ASVPSKAN8 Artificial sequences circular phagemid dis... 38 0.73
gb|U40374|CVU40374 Luciferase reporter gene shuttle vector pMH3... 38 0.73
gb|L11614|SYNPEV41A Cloning vector pEV41 beta-lactamase and car... 38 0.73
gb|U82000|EVU82000 Expression vector pJB861, complete sequence 38 0.73
emb|X06404|PUC4KAN Cloning vector pUC4K linker and kanamycin re... 38 0.73
gb|L08931|SYNPMAC78V pMAC7-8 cloning vector for site-directed m... 38 0.73
gb|J01728|PSC101ISA Insertion element IS102, from plasmid pSC101. 38 0.73
gb|L08930|SYNPMAC58V pMAC5-8 cloning vector for site-directed m... 38 0.73
gb|M10596|TRN903A2 Transposon Tn903, encoding kanamycin phospho... 38 0.73
dbj|D85525|SYNPBEN66 Cloning vector pBEN66 DNA for aminoglycosi... 38 0.73
gb|M88655|SYNPDBLUE Expression vector p-delta-blue DNA fragment. 38 0.73
gb|M18327|SYNPBGS9 Cloning vector with pBGS9 kanamycin resistan... 38 0.73
emb|Z46232|PPPPIC3K P.pastoris DNA for pPIC3K expression vector. 38 0.73
dbj|D63842|SYNAPG3C Cloning vector pKF298 DNA, complete sequence 38 0.73
gb|U75323|CVU75323 Cloning vector pJB3Km1, complete sequence 38 0.73
gb|M22735|TRNDR1 Transposon Tn602 IS602L region DNA, 5' end. 38 0.73
gb|U34316|XXU34316 E.coli/Kluyveromyces lactis shuttle vector p... 38 0.73
gb|M10597|TRN903A3 Transposon Tn903, 3' end with insertion elem... 38 0.73
gb|U16281|XXU16281 Cloning vector pACpET24, complete sequence 38 0.73
emb|X85436|ASPLF14 Shuttle vector pLF14 cat, repA and repB genes 38 0.73
emb|X01654|STPSC101 Salmonella low copy number plasmid pSC101 38 0.73
gb|M10519|PSC101IS2 Insertion element IS102 from Plasmid pHS1, ... 38 0.73
emb|X02527|IS903B E. coli transposable element variant IS903.B ... 38 0.73
gb|AF062080|AF062080 Cloning vector p34S-Km, complete sequence 38 0.73
gb|AF061922|AF061922 Plasposon pTnMod-OKm', complete sequence 38 0.73
gb|L36547|PSEMT Pseudomonas aeruginosa 2293E multiresistance b-... 38 0.73
dbj|D45834|SYNPKF339 Size marker plasmid pKF339 DNA, complete s... 38 0.73
gb|M18329|SYNPBGS9B Cloning vector pBGS9- with the kanamycin re... 38 0.73
gb|M18328|SYNPBGS9A Cloning vector pBGS9+ with the kanamycin re... 38 0.73
emb|V00621|ISTN90 Transposon Tn903 (which codes for kanamycin r... 38 0.73
gb|M33655|ENTLACBOHI Plasmid PDS075 (from E.cloacae) beta-lacta... 38 0.73
gb|AF061930|AF061930 Plasposon pTnMod-RKm, complete sequence 38 0.73
gb|AC004690|AC004690 Homo sapiens PAC clone DJ0630C24 from 7q31... 38 0.73
gb|U37024|CVU37024 Cloning vector pHUKH2, complete sequence. 38 0.73
gb|U65078|CVU65078 Cloning shuttle vector pNF2214 with kanamyci... 38 0.73
gb|AF035682| Cloning vector pLG338/30, complete sequence 38 0.73
gb|U37069|CVU37069 Cloning vector pHUKH4, complete sequence. 38 0.73
dbj|D45833|SYNPKF4 Enforcement (kyosei-) cloning vector pKF4 DN... 38 0.73
gb|M33637|SYNPMAMA Artificial cloning vector pMAMPF. 38 0.73
gb|L08932|SYNMACBG14 pMAC5-bg14 cloning vector for site-directe... 38 0.73
emb|X16093|STHK022N Lambdoid Phage HK022 nun gene and immunity ... 38 0.73
gb|AF053356|AF053356 Homo sapiens chromosome 7q22 sequence, com... 38 0.73
emb|V00359|ECT903 Transposon Tn903 >gi|154941|gb|J01839|TRN903 ... 38 0.73
emb|Y14437|ECPBHRK19 Escherichia coli cloning vector plasmid DN... 38 0.73
emb|Y14438|ECPBHRK18 Escherichia coli cloning vector plasmid DN... 38 0.73
gb|U50199|CELT14F9 Caenorhabditis elegans cosmid T14F9. 38 0.73
gb|M22737|TRNDR3 Transposon Tn602 Kan-R gene, 3' end. 38 0.73
emb|X13003|PMK20 Plasmid pMK20 cloning vector 38 0.73
emb|Z46234|PPPPIC9K P.pastoris DNA for pPIC9K expression vector. 38 0.73
gb|U63147|SCU63147 Synthetic construct of transposon TyK Tn903 ... 38 0.73
gb|U84737|U84737 Synthetic transposon TyK'GFP+, complete sequence 38 0.73
emb|X91840|KPBLACMY2 K.pneumoniae plasmid DNA for bla CMY-2 gene 38 0.73
gb|U04893|PKSM710 Cloning vector pKSM710, complete sequence. 38 0.73
dbj|D16685|RICLT36RGL Rice gene for lactate dehydrogenase, comp... 38 0.73
dbj|D63847|SYNAPG3H Cloning vector pKF19k DNA, complete sequence 38 0.73
dbj|D63846|SYNAPG3G Cloning vector pKF18k DNA, complete sequence 38 0.73
dbj|D63843|SYNAPG3D Cloning vector pKF299 DNA, complete sequence 38 0.73
dbj|D13251|SYNPLGLACZ Plasmid pLGlacz7 DNA 38 0.73
gb|U34317|XXU34317 E.coli/Kluyveromyces lactis shuttle vector p... 38 0.73
gb|U37068|CVU37068 Cloning vector pHUKH3, complete sequence. 38 0.73
gb|U37023|CVU37023 Cloning vector pHUKH1, complete sequence. 38 0.73
gb|L08776|SYNACYC177 Cloning vector pACYC177. 38 0.73
gb|U75992|CVU75992 Cloning vector pPAC4, complete sequence 38 0.73
gb|U23486|CELF07F6 Caenorhabditis elegans cosmid F07F6 36 2.9
gb|M29255|ECOTOXHS E.coli heat-stable toxin (st) gene, complete cds.
Length = 336
Score = 355 bits (179), Expect = 2e-96
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 158 gtaataaaagtggtcctgaaagcatgaatagtagcaattactgctgtgaattgtgttgta 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gtaataaaagtggtcctgaaagcatgaatagtagcaattactgctgtgaattgtgttgta 217
Query: 218 atcctgcttgtaccgggtgctattaataatataaagggaactaaacagttccctttatat 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 atcctgcttgtaccgggtgctattaataatataaagggaactaaacagttccctttatat 277
Query: 278 ttgttctgattctgatgatgtctgtaacgtatgtcctgttgctttgttgaataaatcga 336
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ttgttctgattctgatgatgtctgtaacgtatgtcctgttgctttgttgaataaatcga 336
Score = 212 bits (107), Expect = 2e-53
Identities = 107/107 (100%), Positives = 107/107 (100%)
Query: 1 tggatgccatgttccggaggtaatatgaagaaatcaatattatttatttttctttctgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggatgccatgttccggaggtaatatgaagaaatcaatattatttatttttctttctgta 60
Query: 61 ttgtctttttcacctttcgctcaggatgctaaaccagtagagtcttc 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgtctttttcacctttcgctcaggatgctaaaccagtagagtcttc 107
Score = 36.2 bits (18), Expect = 2.9
Identities = 30/34 (88%), Positives = 30/34 (88%)
Query: 245 aatataaagggaactaaacagttccctttatatt 278
||||||||||||||| |||||||||||||||
Sbjct: 278 aatataaagggaactgtttagttccctttatatt 245
gb|J03311|ECOSTET E. coli estA4 gene encoding a methanol soluble heat-stable
enterotoxin (STA4), complete cds.
Length = 962
Score = 341 bits (172), Expect = 4e-92
Identities = 179/180 (99%), Positives = 179/180 (99%), Gaps = 1/180 (0%)
Query: 158 gtaataaaagtggtcctgaaagcatgaatagtagcaattactgctgtgaattgtgttgta 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gtaataaaagtggtcctgaaagcatgaatagtagcaattactgctgtgaattgtgttgta 688
Query: 218 atcctgcttgtaccgggtgctattaataatataaagggaactaaacagttccctttatat 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 atcctgcttgtaccgggtgctattaataatataaagggaactaaacagttccctttatat 748
Query: 278 ttgttctgattctgatgatgtctgtaacgtatgt-cctgttgctttgttgaataaatcga 336
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 749 ttgttctgattctgatgatgtctgtaacgtatgtacctgttgctttgttgaataaatcga 808
Score = 206 bits (104), Expect = 1e-51
Identities = 104/104 (100%), Positives = 104/104 (100%)
Query: 4 atgccatgttccggaggtaatatgaagaaatcaatattatttatttttctttctgtattg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 atgccatgttccggaggtaatatgaagaaatcaatattatttatttttctttctgtattg 534
Query: 64 tctttttcacctttcgctcaggatgctaaaccagtagagtcttc 107
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tctttttcacctttcgctcaggatgctaaaccagtagagtcttc 578
Score = 36.2 bits (18), Expect = 2.9
Identities = 30/34 (88%), Positives = 30/34 (88%)
Query: 245 aatataaagggaactaaacagttccctttatatt 278
||||||||||||||| |||||||||||||||
Sbjct: 749 aatataaagggaactgtttagttccctttatatt 716
gb|M34916|ECOHSEST E.coli heat-stable enterotoxin gene, complete cds.
Length = 360
Score = 341 bits (172), Expect = 4e-92
Identities = 179/180 (99%), Positives = 179/180 (99%), Gaps = 1/180 (0%)
Query: 158 gtaataaaagtggtcctgaaagcatgaatagtagcaattactgctgtgaattgtgttgta 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtaataaaagtggtcctgaaagcatgaatagtagcaattactgctgtgaattgtgttgta 240
Query: 218 atcctgcttgtaccgggtgctattaataatataaagggaactaaacagttccctttatat 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcctgcttgtaccgggtgctattaataatataaagggaactaaacagttccctttatat 300
Query: 278 ttgttctgattctgatgatgtctgtaacgtatgt-cctgttgctttgttgaataaatcga 336
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 301 ttgttctgattctgatgatgtctgtaacgtatgtacctgttgctttgttgaataaatcga 360
Score = 188 bits (95), Expect = 3e-46
Identities = 105/107 (98%), Positives = 105/107 (98%), Gaps = 1/107 (0%)
Query: 1 tggatgccatgttccggaggtaatatgaagaaatcaatattatttatttttctttctgta 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 tggatgccatgt-ccggaggtaatatgaagaaatcaatattatttatttttctttctgta 83
Query: 61 ttgtctttttcacctttcgctcaggatgctaaaccagtagagtcttc 107
|||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 84 ttgtctttttcacctttccctcaggatgctaaaccagtagagtcttc 130
Score = 36.2 bits (18), Expect = 2.9
Identities = 30/34 (88%), Positives = 30/34 (88%)
Query: 245 aatataaagggaactaaacagttccctttatatt 278
||||||||||||||| |||||||||||||||
Sbjct: 301 aatataaagggaactgtttagttccctttatatt 268
gb|M18346|ECOESTA3A E.coli estA3 gene encoding heat-stable enterotoxin A3 (STa3)
protein, complete cds.
Length = 403
Score = 246 bits (124), Expect = 2e-63
Identities = 124/124 (100%), Positives = 124/124 (100%)
Query: 158 gtaataaaagtggtcctgaaagcatgaatagtagcaattactgctgtgaattgtgttgta 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gtaataaaagtggtcctgaaagcatgaatagtagcaattactgctgtgaattgtgttgta 339
Query: 218 atcctgcttgtaccgggtgctattaataatataaagggaactaaacagttccctttatat 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 atcctgcttgtaccgggtgctattaataatataaagggaactaaacagttccctttatat 399
Query: 278 ttgt 281
||||
Sbjct: 400 ttgt 403
Score = 212 bits (107), Expect = 2e-53
Identities = 107/107 (100%), Positives = 107/107 (100%)
Query: 1 tggatgccatgttccggaggtaatatgaagaaatcaatattatttatttttctttctgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tggatgccatgttccggaggtaatatgaagaaatcaatattatttatttttctttctgta 182
Query: 61 ttgtctttttcacctttcgctcaggatgctaaaccagtagagtcttc 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttgtctttttcacctttcgctcaggatgctaaaccagtagagtcttc 229
Score = 36.2 bits (18), Expect = 2.9
Identities = 30/34 (88%), Positives = 30/34 (88%)
Query: 245 aatataaagggaactaaacagttccctttatatt 278
||||||||||||||| |||||||||||||||
Sbjct: 400 aatataaagggaactgtttagttccctttatatt 367
gb|M18345|ECOESTA2A E.coli estA2 gene encoding heat-stable enterotoxin A2 (STa2)
protein, complete cds.
Length = 549
Score = 228 bits (115), Expect = 4e-58
Identities = 121/123 (98%), Positives = 121/123 (98%)
Query: 159 taataaaagtggtcctgaaagcatgaatagtagcaattactgctgtgaattgtgttgtaa 218
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 taatgaaagtagtcctgaaagcatgaatagtagcaattactgctgtgaattgtgttgtaa 342
Query: 219 tcctgcttgtaccgggtgctattaataatataaagggaactaaacagttccctttatatt 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tcctgcttgtaccgggtgctattaataatataaagggaactaaacagttccctttatatt 402
Query: 279 tgt 281
|||
Sbjct: 403 tgt 405
Score = 155 bits (78), Expect = 5e-36
Identities = 93/98 (94%), Positives = 93/98 (94%)
Query: 10 tgttccggaggtaatatgaagaaatcaatattatttatttttctttctgtattgtctttt 69
|||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 134 tgtttcggaggtaatatgaaaaaatcaatattatttatttttctttctgtattatctttt 193
Query: 70 tcacctttcgctcaggatgctaaaccagtagagtcttc 107
|||||||||||||||||||||||||||| || ||||||
Sbjct: 194 tcacctttcgctcaggatgctaaaccagcagggtcttc 231
Score = 36.2 bits (18), Expect = 2.9
Identities = 30/34 (88%), Positives = 30/34 (88%)
Query: 245 aatataaagggaactaaacagttccctttatatt 278
||||||||||||||| |||||||||||||||
Sbjct: 402 aatataaagggaactgtttagttccctttatatt 369
gb|M58746|ECOESTA1 E.coli toxin I (estA1) gene, complete cds.O
Length = 667
Score = 44.1 bits (22), Expect = 0.012
Identities = 28/30 (93%), Positives = 28/30 (93%)
Query: 195 ttactgctgtgaattgtgttgtaatcctgc 224
||||||||||||| | ||||||||||||||
Sbjct: 465 ttactgctgtgaactttgttgtaatcctgc 494
gb|M25607|ECOSTI E.coli heat-stable enterotoxin I gene, complete cds.
Length = 658
Score = 44.1 bits (22), Expect = 0.012
Identities = 28/30 (93%), Positives = 28/30 (93%)
Query: 195 ttactgctgtgaattgtgttgtaatcctgc 224
||||||||||||| | ||||||||||||||
Sbjct: 456 ttactgctgtgaactttgttgtaatcctgc 485
emb|V00612|ISTN16 Transposon Tn1681 (which codes for a heat-stable toxin in E. coli).
>gi|154851|gb|J01831|TRN1681ST transposon tn1681
encoding heat-stable (st) toxin.
Length = 658
Score = 44.1 bits (22), Expect = 0.012
Identities = 28/30 (93%), Positives = 28/30 (93%)
Query: 195 ttactgctgtgaattgtgttgtaatcctgc 224
||||||||||||| | ||||||||||||||
Sbjct: 456 ttactgctgtgaactttgttgtaatcctgc 485
gb|U28729|CELR153 Caenorhabditis elegans cosmid R153
Length = 29626
Score = 42.1 bits (21), Expect = 0.047
Identities = 21/21 (100%), Positives = 21/21 (100%)
Query: 40 ttatttatttttctttctgta 60
|||||||||||||||||||||
Sbjct: 8964 ttatttatttttctttctgta 8984
gb|U58751|CELC07G1 Caenorhabditis elegans cosmid C07G1.
Length = 44298
Score = 42.1 bits (21), Expect = 0.047
Identities = 21/21 (100%), Positives = 21/21 (100%)
Query: 158 gtaataaaagtggtcctgaaa 178
|||||||||||||||||||||
Sbjct: 14683 gtaataaaagtggtcctgaaa 14663
emb|Z97056|HS434P1 Human DNA sequence from PAC 434P1 on chromosome 22. Contains inward
rectifier potassium channel 4, (potassium channel, inwardly
rectifying, subfamily J, member 4) (hippocampal inward
rectifier) (HIR) (HRK1) (HIRK2) (KIR2.3...
Length = 124990
Score = 42.1 bits (21), Expect = 0.047
Identities = 21/21 (100%), Positives = 21/21 (100%)
Query: 37 atattatttatttttctttct 57
|||||||||||||||||||||
Sbjct: 103659 atattatttatttttctttct 103679
gb|AE000659|HUAE000659 Homo sapiens T-cell receptor alpha delta locus from bases 250472 to
501670 (section 2 of 5) of the Complete Nucleotide Sequence
Length = 251199
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%), Positives = 20/20 (100%)
Query: 204 tgaattgtgttgtaatcctg 223
||||||||||||||||||||
Sbjct: 247203 tgaattgtgttgtaatcctg 247184
gb|U28739|CELC17G10 Caenorhabditis elegans cosmid C17G10
Length = 40261
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%), Positives = 20/20 (100%)
Query: 36 aatattatttatttttcttt 55
||||||||||||||||||||
Sbjct: 29746 aatattatttatttttcttt 29765
emb|Z98849|SPAC17A5 S.pombe chromosome I cosmid c17A5
Length = 42854
Score = 40.1 bits (20), Expect = 0.18
Identities = 26/28 (92%), Positives = 26/28 (92%)
Query: 30 gaaatcaatattatttatttttctttct 57
||||||||||||||||||| || |||||
Sbjct: 4862 gaaatcaatattatttattattatttct 4889
emb|X60106|ECCSVR E.coli csvR gene
Length = 4689
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2658 gctttgttgaataaatcga 2676
dbj|D63844|SYNAPG3E Cloning vector pKF16k DNA, complete sequence
Length = 2215
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1243 gctttgttgaataaatcga 1261
Score = 36.2 bits (18), Expect = 2.9
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 318 gctttgttgaataaatcg 335
||||||||||||||||||
Sbjct: 260 gctttgttgaataaatcg 243
emb|Z72004|HSJ256K2A Human DNA sequence from cosmid J256K24, between markers DXS6791 and
DXS8038 on chromosome X contains EST and STSs.
Length = 63646
Score = 38.2 bits (19), Expect = 0.73
Identities = 22/23 (95%), Positives = 22/23 (95%)
Query: 41 tatttatttttctttctgtattg 63
|||||||||||||| ||||||||
Sbjct: 6811 tatttatttttcttgctgtattg 6833
gb|M65202|RTSTSG Plasmid Rst1 Tsg fragment ORF-I, and kanamycin resistance gene,
complete cds.
Length = 2262
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1318 gctttgttgaataaatcga 1300
gb|M19415|SYNHSG299 Synthetic plasimd pHSG299 DNA.
Length = 2676
Score = 36.2 bits (18), Expect = 2.9
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 318 gctttgttgaataaatcg 335
||||||||||||||||||
Sbjct: 1204 gctttgttgaataaatcg 1221
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 221 gctttgttgaataaatcga 203
gb|U25270|CVACYCNMT Expression cloning vector pACYC177/ET3d/yNMT, complete sequence.
Length = 4943
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2797 gctttgttgaataaatcga 2815
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1814 gctttgttgaataaatcga 1796
emb|X06402|PACYC177 Cloning vector pACYC177
Length = 3941
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2800 gctttgttgaataaatcga 2818
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1817 gctttgttgaataaatcga 1799
gb|U34318|XXU34318 E.coli/Kluyveromyces lactis shuttle vector pCXJ6.
Length = 7713
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 5020 gctttgttgaataaatcga 5038
emb|AJ000058|ATAJ0058 Arabidopsis thaliana mRNA for MCM3 homolog
Length = 2638
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 23 atatgaagaaatcaatatt 41
|||||||||||||||||||
Sbjct: 2386 atatgaagaaatcaatatt 2404
gb|M36415|SYNPFXBLUE Synthetic E.coli pfxblue gene, complete cds.
Length = 3627
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 87 gctttgttgaataaatcga 105
gb|M11420|TRN26IS Transposon Tn2680 insertion site for insertion element IS903.B,
upstream of kanamycin resistance gene.
Length = 194
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 57 gctttgttgaataaatcga 39
dbj|D63845|SYNAPG3F Cloning vector pKF17k DNA, complete sequence
Length = 2215
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1243 gctttgttgaataaatcga 1261
Score = 36.2 bits (18), Expect = 2.9
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 318 gctttgttgaataaatcg 335
||||||||||||||||||
Sbjct: 260 gctttgttgaataaatcg 243
gb|AF061921|AF061921 Plasposon pTnMod-OKm, complete sequence
Length = 5098
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1034 gctttgttgaataaatcga 1016
dbj|D63841|SYNAPG3B Cloning vector pKF297 DNA, complete sequence
Length = 2215
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1243 gctttgttgaataaatcga 1261
Score = 36.2 bits (18), Expect = 2.9
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 318 gctttgttgaataaatcg 335
||||||||||||||||||
Sbjct: 260 gctttgttgaataaatcg 243
dbj|D63840|SYNAPG3A Cloning vector pKF296 DNA, complete sequence
Length = 2215
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1243 gctttgttgaataaatcga 1261
Score = 36.2 bits (18), Expect = 2.9
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 318 gctttgttgaataaatcg 335
||||||||||||||||||
Sbjct: 260 gctttgttgaataaatcg 243
emb|X84307|ASVPSKAN8 Artificial sequences circular phagemid display vector pSKAN8
Length = 5635
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 4103 gctttgttgaataaatcga 4121
gb|U40374|CVU40374 Luciferase reporter gene shuttle vector pMH30, complete sequence.
>gi|3006332|gb|I70197|I70197 Sequence 12 from patent US
5679515
Length = 6047
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 998 gctttgttgaataaatcga 1016
gb|L11614|SYNPEV41A Cloning vector pEV41 beta-lactamase and carrier protein genes,
complete cds's.
Length = 2812
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2591 gctttgttgaataaatcga 2609
gb|U82000|EVU82000 Expression vector pJB861, complete sequence
Length = 7243
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2731 gctttgttgaataaatcga 2749
emb|X06404|PUC4KAN Cloning vector pUC4K linker and kanamycin region
Length = 3914
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 658 gctttgttgaataaatcga 640
gb|L08931|SYNPMAC78V pMAC7-8 cloning vector for site-directed mutagenesis.
Length = 3788
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2650 gctttgttgaataaatcga 2668
gb|J01728|PSC101ISA Insertion element IS102, from plasmid pSC101.
Length = 1077
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 12 gctttgttgaataaatcga 30
gb|L08930|SYNPMAC58V pMAC5-8 cloning vector for site-directed mutagenesis.
Length = 3803
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2650 gctttgttgaataaatcga 2668
gb|M10596|TRN903A2 Transposon Tn903, encoding kanamycin phosphotransferase, partial
cds, and insertion element IS903.
Length = 166
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 28 gctttgttgaataaatcga 10
dbj|D85525|SYNPBEN66 Cloning vector pBEN66 DNA for aminoglycoside 3'-phosphotransferase,
beta-lactamase, complete cds
Length = 3306
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1137 gctttgttgaataaatcga 1155
gb|M88655|SYNPDBLUE Expression vector p-delta-blue DNA fragment.
Length = 3507
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 87 gctttgttgaataaatcga 105
gb|M18327|SYNPBGS9 Cloning vector with pBGS9 kanamycin resistance gene from Tn903, lacZ
alpha-peptide gene and pBR322 origin.
Length = 3665
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 3306 gctttgttgaataaatcga 3324
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2323 gctttgttgaataaatcga 2305
emb|Z46232|PPPPIC3K P.pastoris DNA for pPIC3K expression vector.
Length = 9010
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 3619 gctttgttgaataaatcga 3601
dbj|D63842|SYNAPG3C Cloning vector pKF298 DNA, complete sequence
Length = 2203
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1231 gctttgttgaataaatcga 1249
Score = 36.2 bits (18), Expect = 2.9
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 318 gctttgttgaataaatcg 335
||||||||||||||||||
Sbjct: 248 gctttgttgaataaatcg 231
gb|U75323|CVU75323 Cloning vector pJB3Km1, complete sequence
Length = 6052
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1011 gctttgttgaataaatcga 1029
gb|M22735|TRNDR1 Transposon Tn602 IS602L region DNA, 5' end.
Length = 123
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 12 gctttgttgaataaatcga 30
gb|U34316|XXU34316 E.coli/Kluyveromyces lactis shuttle vector pCXJ3.
Length = 5954
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 3261 gctttgttgaataaatcga 3279
gb|M10597|TRN903A3 Transposon Tn903, 3' end with insertion element IS903 encoding
transposase and kanamycin phosphotransferase, partial
cds.
Length = 1384
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 329 gctttgttgaataaatcga 347
gb|U16281|XXU16281 Cloning vector pACpET24, complete sequence
Length = 3259
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1817 gctttgttgaataaatcga 1799
emb|X85436|ASPLF14 Shuttle vector pLF14 cat, repA and repB genes
Length = 3471
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 413 gctttgttgaataaatcga 395
emb|X01654|STPSC101 Salmonella low copy number plasmid pSC101
Length = 9263
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 6917 gctttgttgaataaatcga 6935
gb|M10519|PSC101IS2 Insertion element IS102 from Plasmid pHS1, 3' end.
>gi|341290|gb|M25012|INS102S2 Insertion sequence IS102,
3' end.
Length = 101
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 100 gctttgttgaataaatcga 82
emb|X02527|IS903B E. coli transposable element variant IS903.B present on kanamycin
resistance transposon Tn 2680
Length = 1209
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 123 gctttgttgaataaatcga 141
gb|AF062080|AF062080 Cloning vector p34S-Km, complete sequence
Length = 4026
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1052 gctttgttgaataaatcga 1070
gb|AF061922|AF061922 Plasposon pTnMod-OKm', complete sequence
Length = 5098
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1797 gctttgttgaataaatcga 1815
gb|L36547|PSEMT Pseudomonas aeruginosa 2293E multiresistance b-lactamase transposon
Tn1412.
Length = 24489
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 20870 gctttgttgaataaatcga 20888
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 23915 gctttgttgaataaatcga 23897
dbj|D45834|SYNPKF339 Size marker plasmid pKF339 DNA, complete sequence
Length = 11943
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 8044 gctttgttgaataaatcga 8062
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 10498 gctttgttgaataaatcga 10516
Score = 36.2 bits (18), Expect = 2.9
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 318 gctttgttgaataaatcg 335
||||||||||||||||||
Sbjct: 9515 gctttgttgaataaatcg 9498
gb|M18329|SYNPBGS9B Cloning vector pBGS9- with the kanamycin resistance gene from Tn903,
lacZ alpha-peptide of pUC9 and SspI fragment of
bacteriophage f1.
Length = 4357
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 3998 gctttgttgaataaatcga 4016
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 3015 gctttgttgaataaatcga 2997
gb|M18328|SYNPBGS9A Cloning vector pBGS9+ with the kanamycin resistance gene from Tn903,
lacZ alpha-peptide, pBR322 origin, and the SspI fragment
of bacteriophage f1.
Length = 4357
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 3998 gctttgttgaataaatcga 4016
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 3015 gctttgttgaataaatcga 2997
emb|V00621|ISTN90 Transposon Tn903 (which codes for kanamycin resistance in E. coli).
>gi|154949|gb|J01840|TRN903RS Transposon Tn903 inverted
repeat & kanamy. resist. gene 5' end.
Length = 1196
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1056 gctttgttgaataaatcga 1038
gb|M33655|ENTLACBOHI Plasmid PDS075 (from E.cloacae) beta-lactamase (Ohio-1) gene,
complete cds.
Length = 1164
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 53 gctttgttgaataaatcga 35
gb|AF061930|AF061930 Plasposon pTnMod-RKm, complete sequence
Length = 4820
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1519 gctttgttgaataaatcga 1537
gb|AC004690|AC004690 Homo sapiens PAC clone DJ0630C24 from 7q31-q32, complete sequence [Homo
sapiens]
Length = 142123
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 37 atattatttatttttcttt 55
|||||||||||||||||||
Sbjct: 24250 atattatttatttttcttt 24232
gb|U37024|CVU37024 Cloning vector pHUKH2, complete sequence.
Length = 7465
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2705 gctttgttgaataaatcga 2687
gb|U65078|CVU65078 Cloning shuttle vector pNF2214 with kanamycin resistance gene,
complete sequence
Length = 4066
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 3036 gctttgttgaataaatcga 3018
gb|AF035682| Cloning vector pLG338/30, complete sequence
Length = 5215
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 505 gctttgttgaataaatcga 487
gb|U37069|CVU37069 Cloning vector pHUKH4, complete sequence.
Length = 7465
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2307 gctttgttgaataaatcga 2325
dbj|D45833|SYNPKF4 Enforcement (kyosei-) cloning vector pKF4 DNA, complete sequence
Length = 2338
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1397 gctttgttgaataaatcga 1415
Score = 36.2 bits (18), Expect = 2.9
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 318 gctttgttgaataaatcg 335
||||||||||||||||||
Sbjct: 414 gctttgttgaataaatcg 397
gb|M33637|SYNPMAMA Artificial cloning vector pMAMPF.
Length = 4354
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2650 gctttgttgaataaatcga 2668
gb|L08932|SYNMACBG14 pMAC5-bg14 cloning vector for site-directed mutagenesis.
Length = 7224
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2650 gctttgttgaataaatcga 2668
emb|X16093|STHK022N Lambdoid Phage HK022 nun gene and immunity region
Length = 3500
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1534 gctttgttgaataaatcga 1516
gb|AF053356|AF053356 Homo sapiens chromosome 7q22 sequence, complete sequence [Homo sapiens]
Length = 227968
Score = 38.2 bits (19), Expect = 0.73
Identities = 22/23 (95%), Positives = 22/23 (95%)
Query: 40 ttatttatttttctttctgtatt 62
|||||||||||||||||| ||||
Sbjct: 151569 ttatttatttttctttctttatt 151591
emb|V00359|ECT903 Transposon Tn903 >gi|154941|gb|J01839|TRN903 transposon tn903
(complete).
Length = 3094
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2039 gctttgttgaataaatcga 2057
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1056 gctttgttgaataaatcga 1038
emb|Y14437|ECPBHRK19 Escherichia coli cloning vector plasmid DNA pBHRK19
Length = 5721
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1635 gctttgttgaataaatcga 1617
emb|Y14438|ECPBHRK18 Escherichia coli cloning vector plasmid DNA pBHRK18
Length = 5721
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1635 gctttgttgaataaatcga 1617
gb|U50199|CELT14F9 Caenorhabditis elegans cosmid T14F9.
Length = 36679
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 39 attatttatttttctttct 57
|||||||||||||||||||
Sbjct: 18091 attatttatttttctttct 18109
gb|M22737|TRNDR3 Transposon Tn602 Kan-R gene, 3' end.
Length = 188
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 122 gctttgttgaataaatcga 140
emb|X13003|PMK20 Plasmid pMK20 cloning vector
Length = 4028
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2575 gctttgttgaataaatcga 2593
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1592 gctttgttgaataaatcga 1574
emb|Z46234|PPPPIC9K P.pastoris DNA for pPIC9K expression vector.
Length = 9273
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 3632 gctttgttgaataaatcga 3614
gb|U63147|SCU63147 Synthetic construct of transposon TyK Tn903 aminoglycoside
phosphotransferase gene, complete cds
Length = 1251
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1062 gctttgttgaataaatcga 1080
gb|U84737|U84737 Synthetic transposon TyK'GFP+, complete sequence
Length = 1993
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 932 gctttgttgaataaatcga 914
emb|X91840|KPBLACMY2 K.pneumoniae plasmid DNA for bla CMY-2 gene
Length = 3202
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1255 gctttgttgaataaatcga 1237
gb|U04893|PKSM710 Cloning vector pKSM710, complete sequence.
Length = 5071
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2650 gctttgttgaataaatcga 2668
dbj|D16685|RICLT36RGL Rice gene for lactate dehydrogenase, complete cds
Length = 5857
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 35 caatattatttatttttct 53
|||||||||||||||||||
Sbjct: 3921 caatattatttatttttct 3939
dbj|D63847|SYNAPG3H Cloning vector pKF19k DNA, complete sequence
Length = 2203
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1231 gctttgttgaataaatcga 1249
Score = 36.2 bits (18), Expect = 2.9
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 318 gctttgttgaataaatcg 335
||||||||||||||||||
Sbjct: 248 gctttgttgaataaatcg 231
dbj|D63846|SYNAPG3G Cloning vector pKF18k DNA, complete sequence
Length = 2203
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1231 gctttgttgaataaatcga 1249
Score = 36.2 bits (18), Expect = 2.9
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 318 gctttgttgaataaatcg 335
||||||||||||||||||
Sbjct: 248 gctttgttgaataaatcg 231
dbj|D63843|SYNAPG3D Cloning vector pKF299 DNA, complete sequence
Length = 2203
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1231 gctttgttgaataaatcga 1249
Score = 36.2 bits (18), Expect = 2.9
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 318 gctttgttgaataaatcg 335
||||||||||||||||||
Sbjct: 248 gctttgttgaataaatcg 231
dbj|D13251|SYNPLGLACZ Plasmid pLGlacz7 DNA
Length = 8787
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 5304 gctttgttgaataaatcga 5322
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 4321 gctttgttgaataaatcga 4303
gb|U34317|XXU34317 E.coli/Kluyveromyces lactis shuttle vector pCXJ5.
Length = 5698
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 3005 gctttgttgaataaatcga 3023
gb|U37068|CVU37068 Cloning vector pHUKH3, complete sequence.
Length = 7511
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2328 gctttgttgaataaatcga 2346
gb|U37023|CVU37023 Cloning vector pHUKH1, complete sequence.
Length = 7511
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2726 gctttgttgaataaatcga 2708
gb|L08776|SYNACYC177 Cloning vector pACYC177.
Length = 3941
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 2797 gctttgttgaataaatcga 2815
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 1814 gctttgttgaataaatcga 1796
gb|U75992|CVU75992 Cloning vector pPAC4, complete sequence
Length = 19500
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 318 gctttgttgaataaatcga 336
|||||||||||||||||||
Sbjct: 15847 gctttgttgaataaatcga 15829
gb|U23486|CELF07F6 Caenorhabditis elegans cosmid F07F6
Length = 26411
Score = 36.2 bits (18), Expect = 2.9
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 33 atcaatattatttatttt 50
||||||||||||||||||
Sbjct: 4355 atcaatattatttatttt 4338
CPU time: 7.83 user secs. 1.17 sys. secs 9.00 total secs.
Database: Non-redundant GenBank+EMBL+DDBJ+PDB sequences
Posted date: May 27, 1998 7:32 AM
Number of letters in database: 711,246,576
Number of sequences in database: 343,210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 185248
Number of Sequences: 343210
Number of extensions: 185248
Number of successful extensions: 58386
Number of sequences better than 10: 131
length of query: 336
length of database: 711246576
effective HSP length: 19
effective length of query: 317
effective length of database: 704725586
effective search space: 223398010762
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 25 (49.6 bits)
S1: 0 ( 0.5 bits)
S2: 18 (36.2 bits)