HOMEWORK#2
1.Ans :
TI: DNA recognition by beta-sheets in the Arc repressor-operator
crystal structure.
AU: Raumann-BE; Rould-MA;Pabo-CO; Sauer-RT
AD: Department of Biology, Massachusetts Institute of Technology,
Cambridge 02139.
SO: Nature. 1994 Feb 24; 367(6465): 754-7
AB: Transcription of the ant gene during lytic growth of
bacteriophage P22 (ref. 1) is regulated by the cooperative binding
of two Arc repressor dimers to a 21-base-pair operator site. Here
we report the co-crystal structure of this Arc tetramer-operator
complex at 2.6 A resolution. As expected from genetic and structural
studies and from the co-crystal structure of the homologous
Escherichia coli MetJ repressor, each Arc dimer uses an antiparallel
beta-sheet to recognize bases in the major groove. However, the Arc
and MetJ complexes differ in several important ways: the beta-sheet-DNA
interactions of Arc are far less symmetrical; DNA binding by Arc is
accompanied by important conformational changes in the beta-sheet;
and Arc uses a different part of its protein surface for dimer-dimer
interactions.
2.Ans :
The paper of Smith and Sauer. (In PDF format)