ProtParam tool
User provided sequence:
MDPRKVSELR AFVKMCRQDP SVLHTEEMRF LREWVESMGG KVPPATHKAK SEENTKEEKR
DKTTEDNIKT EEPSSEESDL EIDNEGVIEA DTDAPQEMGD ENAEITEAMM DEANEKKGAA
IDALNDGELQ KAIDLFTDAI KLNPRLAILY AKRASVFVKL QKPNAAIRDC DRAIEINPDS
AQPYKWRGKA HRLLGHWEEA ARDLALACKL DYDEDASAML REVQPRAQKI AEHRRKYERK
REEREIKERI ERVKKAREEH EKAQREEEAR RQSGSQFGSF PGGFPGGMPG NFPGGMPGMG
GAMPGMAGMP GLNEILSDPE VLAAMQDPEV MVAFQDVAQN PSNMSKYQNN PKVMNLISKL
SAKFGGHS
References and documentation are available.
Number of amino acids: 368
Molecular weight: 41279.5
Theoretical pI: 5.28
Amino acid composition:
Ala (A) 39 10.6%
Arg (R) 26 7.1%
Asn (N) 16 4.3%
Asp (D) 24 6.5%
Cys (C) 3 0.8%
Gln (Q) 14 3.8%
Glu (E) 45 12.2%
Gly (G) 25 6.8%
His (H) 7 1.9%
Ile (I) 16 4.3%
Leu (L) 22 6.0%
Lys (K) 30 8.2%
Met (M) 18 4.9%
Phe (F) 10 2.7%
Pro (P) 22 6.0%
Ser (S) 19 5.2%
Thr (T) 9 2.4%
Trp (W) 3 0.8%
Tyr (Y) 5 1.4%
Val (V) 15 4.1%
Asx (B) 0 0.0%
Glx (Z) 0 0.0%
Xaa (X) 0 0.0%
Total number of negatively charged residues (Asp + Glu): 69
Total number of positively charged residues (Arg + Lys): 56
Extinction coefficients:
Conditions: 6.0 M guanidium hydrochloride
0.02 M phosphate buffer
pH 6.5
-1 -1
Extinction coefficients are in units of M cm .
The first table lists values computed assuming ALL Cys
residues appear as half cysteines, whereas the second table
assumes that NONE do.
276 278 279 280 282
nm nm nm nm nm
Ext. coefficient 23885 24181 24065 23830 23160
Abs 0.1% (=1 g/l) 0.579 0.586 0.583 0.577 0.561
276 278 279 280 282
nm nm nm nm nm
Ext. coefficient 23450 23800 23705 23470 22800
Abs 0.1% (=1 g/l) 0.568 0.577 0.574 0.569 0.552
Estimated half-life:
The N-terminal of the sequence considered is M (Met).
The estimated half-life is: 30 hour (mammalian reticulocytes, in vitro).
>20 hour (yeast, in vivo).
>10 hour (Escherichia coli, in vivo).
Instability index:
The instability index (II) is computed to be 59.06
This classifies the protein as unstable.
Aliphatic index: 62.69
Grand average of hydropathicity (GRAVY): -0.870