Hemoglobin, the main protein that carry the oxgen through the body in human
have 4 subunits, each subunit contains a Fe ion.  Using rasmol version 2.6
type "script run.txt" on the Rasmol Command Line to run the rasmol, the structural
features of this protein are generated. The plain text and some of the 
represenative images are shown as blow.
 

Run
script "rotax.txt"   script "rotay.txt"   script "growth.txt"
script "show.txt"   echo "Hit any key to continue"   pause
script "show1.txt"   echo "Hit any key to continue"   pause
script "show2.txt"

Rotax.txt
load "hemo.pdb"   restrict none   select all    color structure
strands   refresh   rotate x 5   refresh   rotate x 5   refresh
rotate x 5   refresh   rotate x 5   refresh   rotate x 5   refresh
rotate x 5   refresh   rotate x 5   refresh   rotate x 5   refresh
rotate x 5   refresh   rotate x 5   refresh   rotate x 5   refresh
rotate x 5   refresh   rotate x 5   refresh   rotate x 5   refresh
rotate x 5   refresh   rotate x 5   refresh   rotate x 5   refresh

 

Rotay.txt
rotate y 5   refresh   rotate y 5   refresh   rotate y 5   refresh
rotate y 5   refresh   rotate y 5   refresh   rotate y 5   refresh
rotate y 5   refresh   rotate y 5   refresh   rotate y 5   refresh
rotate y 5   refresh   rotate y 5   refresh   rotate y 5   refresh
rotate y 5   refresh   rotate y 5   refresh   rotate y 5   refresh
rotate y 5   refresh   rotate y 5   refresh   rotate y 5   refresh
rotate y 5   refresh   rotate y 5   refresh   rotate y 5   refresh
rotate y 5   refresh   rotate y 5   refresh   rotate y 5   refresh

 

Growth.txt
spacefill 0.1   refresh   spacefill 0.2   refresh   spacefill 0.3
refresh   spacefill 0.4   refresh   spacefill 0.5   refresh
spacefill 0.6   refresh   spacefill 0.7   refresh   spacefill 0.8
refresh   spacefill 0.9   refresh   spacefill 1.0   refresh
spacefill 1.1   refresh   spacefill 1.2   refresh   spacefill 1.3
refresh   spacefill 1.4   refresh   spacefill 1.5   refresh
spacefill 1.6   refresh   spacefill 1.7   refresh   spacefill 1.8
refresh   spacefill 1.9   refresh   spacefill 2.0   refresh

 

Show.txt
restrict none   select all   Wireframe   refresh   select *a
refresh   color red   refresh   select *b   refresh   color orange
refresh   select *c   refresh   color green   refresh   select *d
refresh   color blue   refresh



Show1.txt
select all   refresh   select *.fe   refresh   label Fe
refresh   color label yellow



Show2.txt
restrict *a   refresh   zoom 50   refresh   zoom 60   refresh
zoom 70   refresh   zoom 80   refresh   zoom 90   refresh
zoom 100   refresh   zoom 110   refresh   zoom 120   refresh
zoom 130   refresh   zoom 140   refresh   zoom 150   refresh
zoom 160   refresh   zoom 170   refresh   zoom 180   refresh
hbonds on   refresh   color hbonds green   refresh

 


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