Commencing search, please wait for results.
BLASTN 2.0.4 [Feb-24-1998] Reference: Altschul, Stephen F.,
Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang,
Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a
new generation of protein database search programs", Nucleic Acids Res.
25:3389-3402. Query= (2940 letters) Database: Non-redundant
GenBank+EMBL+DDBJ+PDB sequences 341,608 sequences; 692,983,151 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|M64754|SYNMOV2 Moloney murine leukemia virus retroviral vect... 2845 0.0
gb|M77239|SYNRRV Cloning vector pLXSH from Moloney murine leuke... 2845 0.0
dbj|D88622|D88622 Bicistronic retroviral vector 2845 0.0
gb|M64753|SYNMOV1 Moloney murine leukemia virus retroviral vect... 2845 0.0
gb|M28248|SYNMMLPLN4 Moloney murine leukemia virus retroviral v... 2845 0.0
gb|U00220|U00220 Human immunodeficiency virus type 1 Nef protei... 2841 0.0
gb|M28245|SYNMMLPLN1 Moloney murine leukemia virus retroviral v... 2841 0.0
gb|M28247|SYNMMLPLN3 Moloney murine leukemia virus retroviral v... 2841 0.0
gb|M28246|SYNMMLPLN2 Moloney murine leukemia virus retroviral v... 2841 0.0
gb|M63653|SYNMMLPLN6 Moloney murine leukemia virus retroviral v... 2841 0.0
gb|J02263|MLM124 Moloney murine sarcoma virus clone 124 (provir... 2801 0.0
emb|V01185|REMSVX Genome of murine sarcoma virus (strain 124). ... 2785 0.0
gb|J02266|MLMPROCG Moloney murine sarcoma virus (proviral), com... 2761 0.0
gb|U93512|CVU93512 Cloning vector CA1, complete sequence 2292 0.0
gb|AF011892|AF011892 Moloney murine sarcoma virus gag-mos fusio... 2153 0.0
gb|AF033813|AF033813 Moloney murine sarcoma virus, complete genome 1854 0.0
gb|M96854|MMSAAX Moloney murine sarcoma virus gene sequence. 1618 0.0
gb|AF010170|AF010170 Plasmid pAMS with hybrid amphotropic/Molon... 1292 0.0
emb|V01541|REAMLV Abelson murine leukemia virus genome with v-a... 1255 0.0
gb|J02009|MLAPRO Abelson murine leukemia virus (proviral), comp... 1255 0.0
gb|J02264|MLMLTR Moloney murine sarcoma virus unintegrated LTR ... 1156 0.0
gb|J02255|MLMCG Moloney murine leukemia virus, complete genome. 1078 0.0
gb|AF033811|AF033811 Moloney murine leukemia virus, complete ge... 1078 0.0
gb|AF033812|AF033812 Abelson murine leukemia virus, complete ge... 1063 0.0
emb|Z93724|ASZ93724 Murine retrovirus shuttle vector pZIPneoSV(... 1033 0.0
emb|V01182|REMSV3 Left long terminal repeat of Moloney Murine s... 1009 0.0
emb|AJ224004|RVPSF1NBH Retroviral vector plasmid pSF1 (NBH) DNA... 993 0.0
emb|AJ224005|RVPSF1PSN Retroviral vector plasmid pSF1 (PSNEBH) ... 969 0.0
gb|M54792|MLVTSBA1 Murine leukemia virus long terminal repeat, ... 934 0.0
gb|L06433|RATMOMULV Rattus norvegicus c-HA-ras proto-oncogene m... 914 0.0
emb|V01181|REMSV2 Moloney mouse sarcoma virus SRC gene and long... 906 0.0
emb|V00564|HSIL02 Human mRNA encoding interleukin-2 (IL-2) a ly... 894 0.0
gb|S77834|S77834 IL-2=interleukin-2 [human, lymphocytes, mRNA, ... 894 0.0
gb|K03174|GIBIL2 Ape (gibbon) interleukin 2 mRNA. 886 0.0
gb|S82692|S82692 interleukin-2 [human, placenta, term placentas... 886 0.0
emb|X01586|HSIL2R Human mRNA for interleukin 2 886 0.0
gb|M11144|GIBIL2LTR Ape (gibbon) interleukin 2 mRNA containing ... 878 0.0
emb|X96612|EVPCMVPA1 Expression vector pCMVPA1 for protein A fu... 835 0.0
emb|X96610|EVPCMVPA2 Expression vector pCMVPA2 for protein A fu... 835 0.0
emb|X96611|EVPCMVPA3 Expression vector pCMVPA3 for protein A fu... 835 0.0
gb|U90717|TRU90717 Transfection reporter vector pAV4p, complete... 835 0.0
dbj|AB003468|AB003468 Cloning vector pAP3neo DNA, complete sequ... 835 0.0
gb|L07041|NE1EXPVECB pMHNeo eukaryotic expression vector, compl... 831 0.0
gb|L07040|NE1EXPVECA pFNeo eukaryotic expression vector, comple... 831 0.0
gb|U02430|XXU02430 Cloning vector pMAMneoBlue, complete sequence 831 0.0
gb|U02431|XXU02431 Cloning vector pMAMneo-CAT, complete sequence 831 0.0
gb|U02432|XXU02432 Cloning vector pMAMneo, complete sequence 831 0.0
gb|U02434|XXU02434 Cloning vector pSV2neo, complete sequence 831 0.0
gb|U02448|U02448 Cloning vector pMAMneo-LUC, complete sequence. 831 0.0
gb|U13189|CVU13189 Cloning vector pYACneo, complete sequence. 831 0.0
gb|L36555|SYNTCRC Cloning vector murine T-cell receptor C-beta ... 831 0.0
gb|M99569|SYNPWE15 sCos cloning vector SfiI containing bacterio... 831 0.0
gb|M83237|SYNRSV5NEO cDNA expression vector RSV.5(neo). 831 0.0
gb|M99566|SYNSCOS sCos cloning vector SfiI containing bacteriop... 831 0.0
emb|X65279|PWE15 pWE15 cosmid vector DNA 831 0.0
emb|Z12112|PWE15A pWE15A cosmid vector DNA 831 0.0
gb|U52109|CVU52109 Cloning vector pLK-neo DNA. 831 0.0
gb|U89929|CVU89929 Cloning vector pTet-Off, complete sequence 831 0.0
gb|U89930|CVU89930 Cloning vector pTet-On, complete sequence 831 0.0
gb|AF047654|AF047654 Expression vector pSTAR, complete sequence 831 0.0
gb|U55761|CVU55761 Cloning vector pEGFP-1, complete sequence, e... 813 0.0
gb|U55762|CVU55762 Cloning vector pEGFP-N1, complete sequence, ... 813 0.0
gb|U55763|CVU55763 Cloning vector pEGFP-C1, complete sequence, ... 813 0.0
gb|U57608|CVU57608 Cloning vector pEGFP-N2 with enhanced green ... 813 0.0
gb|U57609|CVU57609 Cloning vector pEGFP-N3 with enhanced green ... 813 0.0
gb|AF028239|AF028239 Mammalian expression vector pCMV-Script, c... 813 0.0
gb|AF025668|AF025668 Epitope tagging vector pCMV-Tag 1, complet... 813 0.0
gb|AF041247|AF041247 Expression vector pDual, complete sequence 813 0.0
gb|AF049616|AF049616 Cloning vector pFA2-CREB, complete sequence 813 0.0
gb|AF050498| Fusion trans-activator vector pFA-ATF, complete se... 813 0.0
gb|AF050499| Cloning vector pFA2-elk1, complete sequence 813 0.0
gb|AF050500| Cloning vector pFA-cFos, complete sequence 813 0.0
gb|AF060226|AF060226 Eukaryotic expression vector pCR3.1mBCL-XL... 813 0.0
gb|M64448|MLEENVAB N-tropic ecotropic endogenous retrovirus env... 813 0.0
gb|U19278|XXU19278 Cloning vector pGFP-C3 green fluorescent pro... 813 0.0
gb|U19280|XXU19280 Cloning vector pGFP-C1 green fluorescent pro... 813 0.0
gb|U19281|XXU19281 Cloning vector pGFP-C2 green fluorescent pro... 813 0.0
gb|U19276|XXU19276 Cloning vector pGFP-1 green fluorescent prot... 813 0.0
gb|U19277|XXU19277 Cloning vector pGFP-N3 green fluorescent pro... 813 0.0
gb|U19279|XXU19279 Cloning vector pGFP-N1 green fluorescent pro... 813 0.0
gb|U19282|XXU19282 Cloning vector pGFP-N2 green fluorescent pro... 813 0.0
gb|U37573|XXU37573 Shuttle expression vector pBKCMV. 813 0.0
gb|U36201|CVU36201 Cloning vector pRSGFP-C1, with green fluores... 813 0.0
gb|U36202|CVU36202 Cloning vector pS65T-C1, with green fluoresc... 813 0.0
gb|U57606|CVU57606 Cloning vector pEGFP-C2 with enhanced green ... 813 0.0
gb|U57607|CVU57607 Cloning vector pEGFP-C3 with enhanced green ... 813 0.0
gb|K02729|MLV4070A Mouse leukemia virus (amphotropic) 4070A LTR. 771 0.0
gb|U47120|CVU47120 Cloning vector pCI-neo, mammalian expression... 763 0.0
gb|AF043739|AF043739 Synthetic construct human telomerase catal... 763 0.0
emb|AJ000156|ASAJ156 Artificial DNA. Bicistronic eukaryotic exp... 755 0.0
emb|X57540|CASBREML CAS-BR-E murine leukemia virus, viral genome 731 0.0
gb|M29208|MUSNMYC1 M.musculus N-myc gene, 3' end and MoMuLV-lik... 716 0.0
gb|M64447|MLEENVAA N-tropic ecotropic endogenous retrovirus env... 712 0.0
emb|Z22761|REVPSFF Retroviral expression vector pSFF DNA, compl... 690 0.0
emb|X02794|REFMLVCG Friend murine leukemia virus (F-MuLV) compl... 523 e-146
gb|U94692|RMU94692 Rauscher murine leukemia virus, complete genome 505 e-140
emb|Z11128|REFMLVCGD Friend murine leukemia virus FB29 complete... 492 e-136
emb|Y13893|MULV13893 Murine leukemia virus RNA for gag-pol-env ... 476 e-132
dbj|D88386|D88386 Friend murine leukemia virus complete genome 474 e-131
gb|M93134|MLFCG Friend murine leukemia virus, complete genome. 472 e-130
gb|M64754|SYNMOV2 Moloney murine leukemia virus retroviral vector pLHDCX, complete
sequence.
Length = 6837
Score = 2845 bits (1435), Expect = 0.0
Identities = 1468/1479 (99%), Positives = 1468/1479 (99%), Gaps = 10/1479 (0%)
Query: 1 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 234
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaagaaacagc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 235 ggaaaaatacataactgagaatagaaaagttcagatcaaggtcaggaacaaagaaacagc 294
Query: 121 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 354
Query: 181 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 414
Query: 241 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 474
Query: 301 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 534
Query: 361 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 594
Query: 421 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 654
Query: 481 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 714
Query: 541 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 774
Query: 601 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 834
Query: 661 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 894
Query: 721 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 954
Query: 781 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 1014
Query: 841 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 1074
Query: 901 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 1134
Query: 961 ccgaagccgcgcgtcttgtct--------gctgcagcatcgttctgtgttgtctctgtct 1012
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1135 ccgaagccgcgcgtcttgtctgctgcagcgctgcagcatcgttctgtgttgtctctgtct 1194
Query: 1013 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1254
Query: 1073 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1314
Query: 1133 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1374
Query: 1193 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1434
Query: 1253 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1494
Query: 1313 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1554
Query: 1373 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1614
Query: 1433 tccagccctcactccttctctaggcg--ggaattcgtta 1469
|||||||||||||||||||||||||| |||||||||||
Sbjct: 1615 tccagccctcactccttctctaggcgccggaattcgtta 1653
Score = 930 bits (469), Expect = 0.0
Identities = 622/665 (93%), Positives = 622/665 (93%), Gaps = 11/665 (1%)
Query: 3 tgaaagaccccacccgtaggt--ggcaagctagcttaagtaacgccactttgcaaggcat 60
|||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 3885 tgaaagaccccacctgtaggtttggcaagctagcttaagtaacgccattttgcaaggcat 3944
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaa-gaaacag 119
|||||||||||||||||||||||| |||||||||||||||||||||||| | | |||||
Sbjct: 3945 ggaaaaatacataactgagaatagagaagttcagatcaaggtcaggaacagatggaacag 4004
Query: 120 ctgaata----ccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaa 175
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4005 ctgaatatgggccaaacaggatatctgtggtaagcagttcctgccccggctcagggccaa 4064
Query: 176 gaacagatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgc 235
||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 4065 gaacagatggaacagctgaat-atgggccaaacaggatatctgtggtaagcagttcctgc 4123
Query: 236 cccggctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 295
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4124 cccggctcagggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 4183
Query: 296 gtgaatcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatt 355
| ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 4184 gagaaccatcagatgtttccagggtgccccaaggacctg-aaatgaccctgtgccttatt 4242
Query: 356 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctca 415
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 4243 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttctgctccccgagctca 4302
Query: 416 ataaaagagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccg 475
|||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||
Sbjct: 4303 ataaaagagcccacaacccctcactcggggcgccagtcctccgattgactgagtcgcccg 4362
Query: 476 ggtacccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgtt 535
||||||||| | |||||||| |||||||| | |||||||||| | ||||||||||||||
Sbjct: 4363 ggtacccgtgtatccaataaaccctcttgcag-ttgcatccgacttgtggtctcgctgtt 4421
Query: 536 ccttgggagggtctcctctgagtgattgactaccc-acgacgggggtctttcatttgggg 594
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 4422 ccttgggagggtctcctctgagtgattgactacccgtcagcgggggtctttcatttgggg 4481
Query: 595 gctcgtccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaag 654
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4482 gctcgtccgggatcgggagacccctgcccagggaccaccgacccaccaccgggaggtaag 4541
Query: 655 ctggc 659
|||||
Sbjct: 4542 ctggc 4546
gb|M77239|SYNRRV Cloning vector pLXSH from Moloney murine leukemia virus, complete
vector sequence.
Length = 6259
Score = 2845 bits (1435), Expect = 0.0
Identities = 1468/1479 (99%), Positives = 1468/1479 (99%), Gaps = 10/1479 (0%)
Query: 1 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 234
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaagaaacagc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 235 ggaaaaatacataactgagaatagaaaagttcagatcaaggtcaggaacaaagaaacagc 294
Query: 121 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 354
Query: 181 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 414
Query: 241 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 474
Query: 301 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 534
Query: 361 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 594
Query: 421 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 654
Query: 481 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 714
Query: 541 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 774
Query: 601 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 834
Query: 661 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 894
Query: 721 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 954
Query: 781 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 1014
Query: 841 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 1074
Query: 901 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 1134
Query: 961 ccgaagccgcgcgtcttgtct--------gctgcagcatcgttctgtgttgtctctgtct 1012
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1135 ccgaagccgcgcgtcttgtctgctgcagcgctgcagcatcgttctgtgttgtctctgtct 1194
Query: 1013 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1254
Query: 1073 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1314
Query: 1133 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1374
Query: 1193 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1434
Query: 1253 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1494
Query: 1313 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1554
Query: 1373 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1614
Query: 1433 tccagccctcactccttctctaggcg--ggaattcgtta 1469
|||||||||||||||||||||||||| |||||||||||
Sbjct: 1615 tccagccctcactccttctctaggcgccggaattcgtta 1653
Score = 636 bits (321), Expect = e-180
Identities = 337/345 (97%), Positives = 337/345 (97%)
Query: 2158 gctgtggaatgtgtgtcagttagggtgtggaaagtccccaggctccccagcaggcagaag 2217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1667 gctgtggaatgtgtgtcagttagggtgtggaaagtccccaggctccccagcaggcagaag 1726
Query: 2218 tatgcaaagcatgcatctcaattagtcagcaaccaggtgtggaaagtccccaggctcccc 2277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1727 tatgcaaagcatgcatctcaattagtcagcaaccaggtgtggaaagtccccaggctcccc 1786
Query: 2278 agcaggcagaagtatgcaaagcatgcatctcaattagtcagcaaccatagtcccgcccct 2337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1787 agcaggcagaagtatgcaaagcatgcatctcaattagtcagcaaccatagtcccgcccct 1846
Query: 2338 aactccgcccatcccgcccctaactccgcccagttccgcccattctccgccccatggctg 2397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1847 aactccgcccatcccgcccctaactccgcccagttccgcccattctccgccccatggctg 1906
Query: 2398 actaannnnnnnnatttatgcagaggccgaggccgcctcggcctctgagctattccagaa 2457
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1907 actaattttttttatttatgcagaggccgaggccgcctcggcctctgagctattccagaa 1966
Query: 2458 gtagtgaggaggcttttttggaggcctaggcttttgcaaaaagct 2502
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1967 gtagtgaggaggcttttttggaggcctaggcttttgcaaaaagct 2011
Score = 930 bits (469), Expect = 0.0
Identities = 622/665 (93%), Positives = 622/665 (93%), Gaps = 11/665 (1%)
Query: 3 tgaaagaccccacccgtaggt--ggcaagctagcttaagtaacgccactttgcaaggcat 60
|||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 3307 tgaaagaccccacctgtaggtttggcaagctagcttaagtaacgccattttgcaaggcat 3366
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaa-gaaacag 119
|||||||||||||||||||||||| |||||||||||||||||||||||| | | |||||
Sbjct: 3367 ggaaaaatacataactgagaatagagaagttcagatcaaggtcaggaacagatggaacag 3426
Query: 120 ctgaata----ccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaa 175
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3427 ctgaatatgggccaaacaggatatctgtggtaagcagttcctgccccggctcagggccaa 3486
Query: 176 gaacagatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgc 235
||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 3487 gaacagatggaacagctgaat-atgggccaaacaggatatctgtggtaagcagttcctgc 3545
Query: 236 cccggctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 295
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3546 cccggctcagggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 3605
Query: 296 gtgaatcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatt 355
| ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 3606 gagaaccatcagatgtttccagggtgccccaaggacctg-aaatgaccctgtgccttatt 3664
Query: 356 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctca 415
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 3665 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttctgctccccgagctca 3724
Query: 416 ataaaagagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccg 475
|||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||
Sbjct: 3725 ataaaagagcccacaacccctcactcggggcgccagtcctccgattgactgagtcgcccg 3784
Query: 476 ggtacccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgtt 535
||||||||| | |||||||| |||||||| | |||||||||| | ||||||||||||||
Sbjct: 3785 ggtacccgtgtatccaataaaccctcttgcag-ttgcatccgacttgtggtctcgctgtt 3843
Query: 536 ccttgggagggtctcctctgagtgattgactaccc-acgacgggggtctttcatttgggg 594
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 3844 ccttgggagggtctcctctgagtgattgactacccgtcagcgggggtctttcatttgggg 3903
Query: 595 gctcgtccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaag 654
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3904 gctcgtccgggatcgggagacccctgcccagggaccaccgacccaccaccgggaggtaag 3963
Query: 655 ctggc 659
|||||
Sbjct: 3964 ctggc 3968
Score = 46.1 bits (23), Expect = 0.027
Identities = 26/27 (96%), Positives = 26/27 (96%)
Query: 2418 cagaggccgaggccgcctcggcctctg 2444
||||||||||||| |||||||||||||
Sbjct: 1953 cagaggccgaggcggcctcggcctctg 1927
dbj|D88622|D88622 Bicistronic retroviral vector
Length = 6072
Score = 2845 bits (1435), Expect = 0.0
Identities = 1468/1479 (99%), Positives = 1468/1479 (99%), Gaps = 10/1479 (0%)
Query: 1 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 234
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaagaaacagc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 235 ggaaaaatacataactgagaatagaaaagttcagatcaaggtcaggaacaaagaaacagc 294
Query: 121 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 354
Query: 181 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 414
Query: 241 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 474
Query: 301 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 534
Query: 361 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 594
Query: 421 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 654
Query: 481 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 714
Query: 541 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 774
Query: 601 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 834
Query: 661 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 894
Query: 721 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 954
Query: 781 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 1014
Query: 841 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 1074
Query: 901 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 1134
Query: 961 ccgaagccgcgcgtcttgtct--------gctgcagcatcgttctgtgttgtctctgtct 1012
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1135 ccgaagccgcgcgtcttgtctgctgcagcgctgcagcatcgttctgtgttgtctctgtct 1194
Query: 1013 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1254
Query: 1073 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1314
Query: 1133 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1374
Query: 1193 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1434
Query: 1253 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1494
Query: 1313 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1554
Query: 1373 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1614
Query: 1433 tccagccctcactccttctctaggcg--ggaattcgtta 1469
|||||||||||||||||||||||||| |||||||||||
Sbjct: 1615 tccagccctcactccttctctaggcgccggaattcgtta 1653
Score = 763 bits (385), Expect = 0.0
Identities = 385/385 (100%), Positives = 385/385 (100%)
Query: 2556 catgattgaacaagatggattgcacgcaggttctccggccgcttgggtggagaggctatt 2615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2263 catgattgaacaagatggattgcacgcaggttctccggccgcttgggtggagaggctatt 2322
Query: 2616 cggctatgactgggcacaacagacaatcggctgctctgatgccgccgtgttccggctgtc 2675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2323 cggctatgactgggcacaacagacaatcggctgctctgatgccgccgtgttccggctgtc 2382
Query: 2676 agcgcaggggcgcccggttctttttgtcaagaccgacctgtccggtgccctgaatgaact 2735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2383 agcgcaggggcgcccggttctttttgtcaagaccgacctgtccggtgccctgaatgaact 2442
Query: 2736 gcaggacgaggcagcgcggctatcgtggctggccacgacgggcgttccttgcgcagctgt 2795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2443 gcaggacgaggcagcgcggctatcgtggctggccacgacgggcgttccttgcgcagctgt 2502
Query: 2796 gctcgacgttgtcactgaagcgggaagggactggctgctattgggcgaagtgccggggca 2855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2503 gctcgacgttgtcactgaagcgggaagggactggctgctattgggcgaagtgccggggca 2562
Query: 2856 ggatctcctgtcatctcaccttgctcctgccgagaaagtatccatcatggctgatgcaat 2915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2563 ggatctcctgtcatctcaccttgctcctgccgagaaagtatccatcatggctgatgcaat 2622
Query: 2916 gcggcggctgcatacgcttgatccg 2940
|||||||||||||||||||||||||
Sbjct: 2623 gcggcggctgcatacgcttgatccg 2647
Score = 930 bits (469), Expect = 0.0
Identities = 622/665 (93%), Positives = 622/665 (93%), Gaps = 11/665 (1%)
Query: 3 tgaaagaccccacccgtaggt--ggcaagctagcttaagtaacgccactttgcaaggcat 60
|||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 3120 tgaaagaccccacctgtaggtttggcaagctagcttaagtaacgccattttgcaaggcat 3179
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaa-gaaacag 119
|||||||||||||||||||||||| |||||||||||||||||||||||| | | |||||
Sbjct: 3180 ggaaaaatacataactgagaatagagaagttcagatcaaggtcaggaacagatggaacag 3239
Query: 120 ctgaata----ccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaa 175
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3240 ctgaatatgggccaaacaggatatctgtggtaagcagttcctgccccggctcagggccaa 3299
Query: 176 gaacagatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgc 235
||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 3300 gaacagatggaacagctgaat-atgggccaaacaggatatctgtggtaagcagttcctgc 3358
Query: 236 cccggctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 295
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3359 cccggctcagggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 3418
Query: 296 gtgaatcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatt 355
| ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 3419 gagaaccatcagatgtttccagggtgccccaaggacctg-aaatgaccctgtgccttatt 3477
Query: 356 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctca 415
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 3478 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttctgctccccgagctca 3537
Query: 416 ataaaagagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccg 475
|||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||
Sbjct: 3538 ataaaagagcccacaacccctcactcggggcgccagtcctccgattgactgagtcgcccg 3597
Query: 476 ggtacccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgtt 535
||||||||| | |||||||| |||||||| | |||||||||| | ||||||||||||||
Sbjct: 3598 ggtacccgtgtatccaataaaccctcttgcag-ttgcatccgacttgtggtctcgctgtt 3656
Query: 536 ccttgggagggtctcctctgagtgattgactaccc-acgacgggggtctttcatttgggg 594
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 3657 ccttgggagggtctcctctgagtgattgactacccgtcagcgggggtctttcatttgggg 3716
Query: 595 gctcgtccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaag 654
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3717 gctcgtccgggatcgggagacccctgcccagggaccaccgacccaccaccgggaggtaag 3776
Query: 655 ctggc 659
|||||
Sbjct: 3777 ctggc 3781
gb|M64753|SYNMOV1 Moloney murine leukemia virus retroviral vector pLXSHD, complete
sequence.
Length = 6374
Score = 2845 bits (1435), Expect = 0.0
Identities = 1468/1479 (99%), Positives = 1468/1479 (99%), Gaps = 10/1479 (0%)
Query: 1 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 234
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaagaaacagc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 235 ggaaaaatacataactgagaatagaaaagttcagatcaaggtcaggaacaaagaaacagc 294
Query: 121 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 354
Query: 181 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 414
Query: 241 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 474
Query: 301 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 534
Query: 361 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 594
Query: 421 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 654
Query: 481 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 714
Query: 541 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 774
Query: 601 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 834
Query: 661 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 894
Query: 721 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 954
Query: 781 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 1014
Query: 841 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 1074
Query: 901 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 1134
Query: 961 ccgaagccgcgcgtcttgtct--------gctgcagcatcgttctgtgttgtctctgtct 1012
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1135 ccgaagccgcgcgtcttgtctgctgcagcgctgcagcatcgttctgtgttgtctctgtct 1194
Query: 1013 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1254
Query: 1073 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1314
Query: 1133 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1374
Query: 1193 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1434
Query: 1253 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1494
Query: 1313 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1554
Query: 1373 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1614
Query: 1433 tccagccctcactccttctctaggcg--ggaattcgtta 1469
|||||||||||||||||||||||||| |||||||||||
Sbjct: 1615 tccagccctcactccttctctaggcgccggaattcgtta 1653
Score = 597 bits (301), Expect = e-168
Identities = 317/325 (97%), Positives = 317/325 (97%)
Query: 2158 gctgtggaatgtgtgtcagttagggtgtggaaagtccccaggctccccagcaggcagaag 2217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1667 gctgtggaatgtgtgtcagttagggtgtggaaagtccccaggctccccagcaggcagaag 1726
Query: 2218 tatgcaaagcatgcatctcaattagtcagcaaccaggtgtggaaagtccccaggctcccc 2277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1727 tatgcaaagcatgcatctcaattagtcagcaaccaggtgtggaaagtccccaggctcccc 1786
Query: 2278 agcaggcagaagtatgcaaagcatgcatctcaattagtcagcaaccatagtcccgcccct 2337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1787 agcaggcagaagtatgcaaagcatgcatctcaattagtcagcaaccatagtcccgcccct 1846
Query: 2338 aactccgcccatcccgcccctaactccgcccagttccgcccattctccgccccatggctg 2397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1847 aactccgcccatcccgcccctaactccgcccagttccgcccattctccgccccatggctg 1906
Query: 2398 actaannnnnnnnatttatgcagaggccgaggccgcctcggcctctgagctattccagaa 2457
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1907 actaattttttttatttatgcagaggccgaggccgcctcggcctctgagctattccagaa 1966
Query: 2458 gtagtgaggaggcttttttggaggc 2482
|||||||||||||||||||||||||
Sbjct: 1967 gtagtgaggaggcttttttggaggc 1991
Score = 46.1 bits (23), Expect = 0.027
Identities = 23/23 (100%), Positives = 23/23 (100%)
Query: 2481 gcctaggcttttgcaaaaagctt 2503
|||||||||||||||||||||||
Sbjct: 3352 gcctaggcttttgcaaaaagctt 3374
Score = 930 bits (469), Expect = 0.0
Identities = 622/665 (93%), Positives = 622/665 (93%), Gaps = 11/665 (1%)
Query: 3 tgaaagaccccacccgtaggt--ggcaagctagcttaagtaacgccactttgcaaggcat 60
|||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 3422 tgaaagaccccacctgtaggtttggcaagctagcttaagtaacgccattttgcaaggcat 3481
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaa-gaaacag 119
|||||||||||||||||||||||| |||||||||||||||||||||||| | | |||||
Sbjct: 3482 ggaaaaatacataactgagaatagagaagttcagatcaaggtcaggaacagatggaacag 3541
Query: 120 ctgaata----ccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaa 175
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3542 ctgaatatgggccaaacaggatatctgtggtaagcagttcctgccccggctcagggccaa 3601
Query: 176 gaacagatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgc 235
||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 3602 gaacagatggaacagctgaat-atgggccaaacaggatatctgtggtaagcagttcctgc 3660
Query: 236 cccggctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 295
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3661 cccggctcagggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 3720
Query: 296 gtgaatcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatt 355
| ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 3721 gagaaccatcagatgtttccagggtgccccaaggacctg-aaatgaccctgtgccttatt 3779
Query: 356 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctca 415
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 3780 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttctgctccccgagctca 3839
Query: 416 ataaaagagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccg 475
|||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||
Sbjct: 3840 ataaaagagcccacaacccctcactcggggcgccagtcctccgattgactgagtcgcccg 3899
Query: 476 ggtacccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgtt 535
||||||||| | |||||||| |||||||| | |||||||||| | ||||||||||||||
Sbjct: 3900 ggtacccgtgtatccaataaaccctcttgcag-ttgcatccgacttgtggtctcgctgtt 3958
Query: 536 ccttgggagggtctcctctgagtgattgactaccc-acgacgggggtctttcatttgggg 594
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 3959 ccttgggagggtctcctctgagtgattgactacccgtcagcgggggtctttcatttgggg 4018
Query: 595 gctcgtccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaag 654
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4019 gctcgtccgggatcgggagacccctgcccagggaccaccgacccaccaccgggaggtaag 4078
Query: 655 ctggc 659
|||||
Sbjct: 4079 ctggc 4083
Score = 46.1 bits (23), Expect = 0.027
Identities = 26/27 (96%), Positives = 26/27 (96%)
Query: 2418 cagaggccgaggccgcctcggcctctg 2444
||||||||||||| |||||||||||||
Sbjct: 1953 cagaggccgaggcggcctcggcctctg 1927
gb|M28248|SYNMMLPLN4 Moloney murine leukemia virus retroviral vector pLXSN, complete
genome.
Length = 5874
Score = 2845 bits (1435), Expect = 0.0
Identities = 1468/1479 (99%), Positives = 1468/1479 (99%), Gaps = 10/1479 (0%)
Query: 1 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 234
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaagaaacagc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 235 ggaaaaatacataactgagaatagaaaagttcagatcaaggtcaggaacaaagaaacagc 294
Query: 121 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 354
Query: 181 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 414
Query: 241 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 474
Query: 301 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 534
Query: 361 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 594
Query: 421 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 654
Query: 481 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 714
Query: 541 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 774
Query: 601 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 834
Query: 661 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 894
Query: 721 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 954
Query: 781 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 1014
Query: 841 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 1074
Query: 901 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 1134
Query: 961 ccgaagccgcgcgtcttgtct--------gctgcagcatcgttctgtgttgtctctgtct 1012
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1135 ccgaagccgcgcgtcttgtctgctgcagcgctgcagcatcgttctgtgttgtctctgtct 1194
Query: 1013 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1254
Query: 1073 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1314
Query: 1133 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1374
Query: 1193 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1434
Query: 1253 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1494
Query: 1313 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1554
Query: 1373 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1614
Query: 1433 tccagccctcactccttctctaggcg--ggaattcgtta 1469
|||||||||||||||||||||||||| |||||||||||
Sbjct: 1615 tccagccctcactccttctctaggcgccggaattcgtta 1653
Score = 1505 bits (759), Expect = 0.0
Identities = 775/783 (98%), Positives = 775/783 (98%)
Query: 2158 gctgtggaatgtgtgtcagttagggtgtggaaagtccccaggctccccagcaggcagaag 2217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1667 gctgtggaatgtgtgtcagttagggtgtggaaagtccccaggctccccagcaggcagaag 1726
Query: 2218 tatgcaaagcatgcatctcaattagtcagcaaccaggtgtggaaagtccccaggctcccc 2277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1727 tatgcaaagcatgcatctcaattagtcagcaaccaggtgtggaaagtccccaggctcccc 1786
Query: 2278 agcaggcagaagtatgcaaagcatgcatctcaattagtcagcaaccatagtcccgcccct 2337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1787 agcaggcagaagtatgcaaagcatgcatctcaattagtcagcaaccatagtcccgcccct 1846
Query: 2338 aactccgcccatcccgcccctaactccgcccagttccgcccattctccgccccatggctg 2397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1847 aactccgcccatcccgcccctaactccgcccagttccgcccattctccgccccatggctg 1906
Query: 2398 actaannnnnnnnatttatgcagaggccgaggccgcctcggcctctgagctattccagaa 2457
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1907 actaattttttttatttatgcagaggccgaggccgcctcggcctctgagctattccagaa 1966
Query: 2458 gtagtgaggaggcttttttggaggcctaggcttttgcaaaaagcttgggctgcaggtcga 2517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1967 gtagtgaggaggcttttttggaggcctaggcttttgcaaaaagcttgggctgcaggtcga 2026
Query: 2518 ggcggatctgatcaagagacaggatgaggatcgtttcgcatgattgaacaagatggattg 2577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2027 ggcggatctgatcaagagacaggatgaggatcgtttcgcatgattgaacaagatggattg 2086
Query: 2578 cacgcaggttctccggccgcttgggtggagaggctattcggctatgactgggcacaacag 2637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2087 cacgcaggttctccggccgcttgggtggagaggctattcggctatgactgggcacaacag 2146
Query: 2638 acaatcggctgctctgatgccgccgtgttccggctgtcagcgcaggggcgcccggttctt 2697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2147 acaatcggctgctctgatgccgccgtgttccggctgtcagcgcaggggcgcccggttctt 2206
Query: 2698 tttgtcaagaccgacctgtccggtgccctgaatgaactgcaggacgaggcagcgcggcta 2757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2207 tttgtcaagaccgacctgtccggtgccctgaatgaactgcaggacgaggcagcgcggcta 2266
Query: 2758 tcgtggctggccacgacgggcgttccttgcgcagctgtgctcgacgttgtcactgaagcg 2817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2267 tcgtggctggccacgacgggcgttccttgcgcagctgtgctcgacgttgtcactgaagcg 2326
Query: 2818 ggaagggactggctgctattgggcgaagtgccggggcaggatctcctgtcatctcacctt 2877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2327 ggaagggactggctgctattgggcgaagtgccggggcaggatctcctgtcatctcacctt 2386
Query: 2878 gctcctgccgagaaagtatccatcatggctgatgcaatgcggcggctgcatacgcttgat 2937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2387 gctcctgccgagaaagtatccatcatggctgatgcaatgcggcggctgcatacgcttgat 2446
Query: 2938 ccg 2940
|||
Sbjct: 2447 ccg 2449
Score = 930 bits (469), Expect = 0.0
Identities = 622/665 (93%), Positives = 622/665 (93%), Gaps = 11/665 (1%)
Query: 3 tgaaagaccccacccgtaggt--ggcaagctagcttaagtaacgccactttgcaaggcat 60
|||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 2922 tgaaagaccccacctgtaggtttggcaagctagcttaagtaacgccattttgcaaggcat 2981
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaa-gaaacag 119
|||||||||||||||||||||||| |||||||||||||||||||||||| | | |||||
Sbjct: 2982 ggaaaaatacataactgagaatagagaagttcagatcaaggtcaggaacagatggaacag 3041
Query: 120 ctgaata----ccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaa 175
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3042 ctgaatatgggccaaacaggatatctgtggtaagcagttcctgccccggctcagggccaa 3101
Query: 176 gaacagatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgc 235
||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 3102 gaacagatggaacagctgaat-atgggccaaacaggatatctgtggtaagcagttcctgc 3160
Query: 236 cccggctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 295
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3161 cccggctcagggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 3220
Query: 296 gtgaatcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatt 355
| ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 3221 gagaaccatcagatgtttccagggtgccccaaggacctg-aaatgaccctgtgccttatt 3279
Query: 356 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctca 415
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 3280 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttctgctccccgagctca 3339
Query: 416 ataaaagagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccg 475
|||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||
Sbjct: 3340 ataaaagagcccacaacccctcactcggggcgccagtcctccgattgactgagtcgcccg 3399
Query: 476 ggtacccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgtt 535
||||||||| | |||||||| |||||||| | |||||||||| | ||||||||||||||
Sbjct: 3400 ggtacccgtgtatccaataaaccctcttgcag-ttgcatccgacttgtggtctcgctgtt 3458
Query: 536 ccttgggagggtctcctctgagtgattgactaccc-acgacgggggtctttcatttgggg 594
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 3459 ccttgggagggtctcctctgagtgattgactacccgtcagcgggggtctttcatttgggg 3518
Query: 595 gctcgtccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaag 654
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3519 gctcgtccgggatcgggagacccctgcccagggaccaccgacccaccaccgggaggtaag 3578
Query: 655 ctggc 659
|||||
Sbjct: 3579 ctggc 3583
Score = 46.1 bits (23), Expect = 0.027
Identities = 26/27 (96%), Positives = 26/27 (96%)
Query: 2418 cagaggccgaggccgcctcggcctctg 2444
||||||||||||| |||||||||||||
Sbjct: 1953 cagaggccgaggcggcctcggcctctg 1927
gb|U00220|U00220 Human immunodeficiency virus type 1 Nef protein and neomycin
phosphotransferase genes, complete cds.
Length = 6506
Score = 2841 bits (1433), Expect = 0.0
Identities = 1457/1466 (99%), Positives = 1457/1466 (99%), Gaps = 8/1466 (0%)
Query: 1 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 234
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaagaaacagc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 235 ggaaaaatacataactgagaatagaaaagttcagatcaaggtcaggaacaaagaaacagc 294
Query: 121 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 354
Query: 181 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 414
Query: 241 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 474
Query: 301 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 534
Query: 361 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 594
Query: 421 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 654
Query: 481 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 714
Query: 541 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 774
Query: 601 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 834
Query: 661 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 894
Query: 721 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 954
Query: 781 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 1014
Query: 841 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 1074
Query: 901 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 1134
Query: 961 ccgaagccgcgcgtcttgtct--------gctgcagcatcgttctgtgttgtctctgtct 1012
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1135 ccgaagccgcgcgtcttgtctgctgcagcgctgcagcatcgttctgtgttgtctctgtct 1194
Query: 1013 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1254
Query: 1073 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1314
Query: 1133 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1374
Query: 1193 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1434
Query: 1253 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1494
Query: 1313 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1554
Query: 1373 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1614
Query: 1433 tccagccctcactccttctctaggcg 1458
||||||||||||||||||||||||||
Sbjct: 1615 tccagccctcactccttctctaggcg 1640
Score = 1505 bits (759), Expect = 0.0
Identities = 775/783 (98%), Positives = 775/783 (98%)
Query: 2158 gctgtggaatgtgtgtcagttagggtgtggaaagtccccaggctccccagcaggcagaag 2217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2299 gctgtggaatgtgtgtcagttagggtgtggaaagtccccaggctccccagcaggcagaag 2358
Query: 2218 tatgcaaagcatgcatctcaattagtcagcaaccaggtgtggaaagtccccaggctcccc 2277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2359 tatgcaaagcatgcatctcaattagtcagcaaccaggtgtggaaagtccccaggctcccc 2418
Query: 2278 agcaggcagaagtatgcaaagcatgcatctcaattagtcagcaaccatagtcccgcccct 2337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2419 agcaggcagaagtatgcaaagcatgcatctcaattagtcagcaaccatagtcccgcccct 2478
Query: 2338 aactccgcccatcccgcccctaactccgcccagttccgcccattctccgccccatggctg 2397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2479 aactccgcccatcccgcccctaactccgcccagttccgcccattctccgccccatggctg 2538
Query: 2398 actaannnnnnnnatttatgcagaggccgaggccgcctcggcctctgagctattccagaa 2457
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2539 actaattttttttatttatgcagaggccgaggccgcctcggcctctgagctattccagaa 2598
Query: 2458 gtagtgaggaggcttttttggaggcctaggcttttgcaaaaagcttgggctgcaggtcga 2517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2599 gtagtgaggaggcttttttggaggcctaggcttttgcaaaaagcttgggctgcaggtcga 2658
Query: 2518 ggcggatctgatcaagagacaggatgaggatcgtttcgcatgattgaacaagatggattg 2577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2659 ggcggatctgatcaagagacaggatgaggatcgtttcgcatgattgaacaagatggattg 2718
Query: 2578 cacgcaggttctccggccgcttgggtggagaggctattcggctatgactgggcacaacag 2637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2719 cacgcaggttctccggccgcttgggtggagaggctattcggctatgactgggcacaacag 2778
Query: 2638 acaatcggctgctctgatgccgccgtgttccggctgtcagcgcaggggcgcccggttctt 2697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2779 acaatcggctgctctgatgccgccgtgttccggctgtcagcgcaggggcgcccggttctt 2838
Query: 2698 tttgtcaagaccgacctgtccggtgccctgaatgaactgcaggacgaggcagcgcggcta 2757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2839 tttgtcaagaccgacctgtccggtgccctgaatgaactgcaggacgaggcagcgcggcta 2898
Query: 2758 tcgtggctggccacgacgggcgttccttgcgcagctgtgctcgacgttgtcactgaagcg 2817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2899 tcgtggctggccacgacgggcgttccttgcgcagctgtgctcgacgttgtcactgaagcg 2958
Query: 2818 ggaagggactggctgctattgggcgaagtgccggggcaggatctcctgtcatctcacctt 2877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2959 ggaagggactggctgctattgggcgaagtgccggggcaggatctcctgtcatctcacctt 3018
Query: 2878 gctcctgccgagaaagtatccatcatggctgatgcaatgcggcggctgcatacgcttgat 2937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3019 gctcctgccgagaaagtatccatcatggctgatgcaatgcggcggctgcatacgcttgat 3078
Query: 2938 ccg 2940
|||
Sbjct: 3079 ccg 3081
Score = 930 bits (469), Expect = 0.0
Identities = 622/665 (93%), Positives = 622/665 (93%), Gaps = 11/665 (1%)
Query: 3 tgaaagaccccacccgtaggt--ggcaagctagcttaagtaacgccactttgcaaggcat 60
|||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 3554 tgaaagaccccacctgtaggtttggcaagctagcttaagtaacgccattttgcaaggcat 3613
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaa-gaaacag 119
|||||||||||||||||||||||| |||||||||||||||||||||||| | | |||||
Sbjct: 3614 ggaaaaatacataactgagaatagagaagttcagatcaaggtcaggaacagatggaacag 3673
Query: 120 ctgaata----ccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaa 175
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3674 ctgaatatgggccaaacaggatatctgtggtaagcagttcctgccccggctcagggccaa 3733
Query: 176 gaacagatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgc 235
||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 3734 gaacagatggaacagctgaat-atgggccaaacaggatatctgtggtaagcagttcctgc 3792
Query: 236 cccggctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 295
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3793 cccggctcagggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 3852
Query: 296 gtgaatcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatt 355
| ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 3853 gagaaccatcagatgtttccagggtgccccaaggacctg-aaatgaccctgtgccttatt 3911
Query: 356 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctca 415
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 3912 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttctgctccccgagctca 3971
Query: 416 ataaaagagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccg 475
|||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||
Sbjct: 3972 ataaaagagcccacaacccctcactcggggcgccagtcctccgattgactgagtcgcccg 4031
Query: 476 ggtacccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgtt 535
||||||||| | |||||||| |||||||| | |||||||||| | ||||||||||||||
Sbjct: 4032 ggtacccgtgtatccaataaaccctcttgcag-ttgcatccgacttgtggtctcgctgtt 4090
Query: 536 ccttgggagggtctcctctgagtgattgactaccc-acgacgggggtctttcatttgggg 594
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 4091 ccttgggagggtctcctctgagtgattgactacccgtcagcgggggtctttcatttgggg 4150
Query: 595 gctcgtccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaag 654
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4151 gctcgtccgggatcgggagacccctgcccagggaccaccgacccaccaccgggaggtaag 4210
Query: 655 ctggc 659
|||||
Sbjct: 4211 ctggc 4215
Score = 46.1 bits (23), Expect = 0.027
Identities = 26/27 (96%), Positives = 26/27 (96%)
Query: 2418 cagaggccgaggccgcctcggcctctg 2444
||||||||||||| |||||||||||||
Sbjct: 2585 cagaggccgaggcggcctcggcctctg 2559
gb|M28245|SYNMMLPLN1 Moloney murine leukemia virus retroviral vector pLN, complete genome.
Length = 5464
Score = 2841 bits (1433), Expect = 0.0
Identities = 1457/1466 (99%), Positives = 1457/1466 (99%), Gaps = 8/1466 (0%)
Query: 1 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 204
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaagaaacagc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaaaaatacataactgagaatagaaaagttcagatcaaggtcaggaacaaagaaacagc 264
Query: 121 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 324
Query: 181 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 384
Query: 241 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 444
Query: 301 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 504
Query: 361 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 564
Query: 421 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 624
Query: 481 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 684
Query: 541 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 744
Query: 601 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 804
Query: 661 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 864
Query: 721 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 924
Query: 781 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 984
Query: 841 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 1044
Query: 901 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 1104
Query: 961 ccgaagccgcgcgtcttgtct--------gctgcagcatcgttctgtgttgtctctgtct 1012
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1105 ccgaagccgcgcgtcttgtctgctgcagcgctgcagcatcgttctgtgttgtctctgtct 1164
Query: 1013 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1224
Query: 1073 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1225 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1284
Query: 1133 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1285 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1344
Query: 1193 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1345 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1404
Query: 1253 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1405 tggcccgcatggacacccagaccaggtcccctacatcgtgacctgggaagccttggcttt 1464
Query: 1313 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1465 tgacccccctccctgggtcaagccctttgtacaccctaagcctccgcctcctcttcctcc 1524
Query: 1373 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1525 atccgccccgtctctcccccttgaacctcctcgttcgaccccgcctcgatcctcccttta 1584
Query: 1433 tccagccctcactccttctctaggcg 1458
||||||||||||||||||||||||||
Sbjct: 1585 tccagccctcactccttctctaggcg 1610
Score = 831 bits (419), Expect = 0.0
Identities = 419/419 (100%), Positives = 419/419 (100%)
Query: 2522 gatctgatcaagagacaggatgaggatcgtttcgcatgattgaacaagatggattgcacg 2581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gatctgatcaagagacaggatgaggatcgtttcgcatgattgaacaagatggattgcacg 1680
Query: 2582 caggttctccggccgcttgggtggagaggctattcggctatgactgggcacaacagacaa 2641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 caggttctccggccgcttgggtggagaggctattcggctatgactgggcacaacagacaa 1740
Query: 2642 tcggctgctctgatgccgccgtgttccggctgtcagcgcaggggcgcccggttctttttg 2701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 tcggctgctctgatgccgccgtgttccggctgtcagcgcaggggcgcccggttctttttg 1800
Query: 2702 tcaagaccgacctgtccggtgccctgaatgaactgcaggacgaggcagcgcggctatcgt 2761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 tcaagaccgacctgtccggtgccctgaatgaactgcaggacgaggcagcgcggctatcgt 1860
Query: 2762 ggctggccacgacgggcgttccttgcgcagctgtgctcgacgttgtcactgaagcgggaa 2821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 ggctggccacgacgggcgttccttgcgcagctgtgctcgacgttgtcactgaagcgggaa 1920
Query: 2822 gggactggctgctattgggcgaagtgccggggcaggatctcctgtcatctcaccttgctc 2881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 gggactggctgctattgggcgaagtgccggggcaggatctcctgtcatctcaccttgctc 1980
Query: 2882 ctgccgagaaagtatccatcatggctgatgcaatgcggcggctgcatacgcttgatccg 2940
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 ctgccgagaaagtatccatcatggctgatgcaatgcggcggctgcatacgcttgatccg 2039
Score = 930 bits (469), Expect = 0.0
Identities = 622/665 (93%), Positives = 622/665 (93%), Gaps = 11/665 (1%)
Query: 3 tgaaagaccccacccgtaggt--ggcaagctagcttaagtaacgccactttgcaaggcat 60
|||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 2512 tgaaagaccccacctgtaggtttggcaagctagcttaagtaacgccattttgcaaggcat 2571
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaa-gaaacag 119
|||||||||||||||||||||||| |||||||||||||||||||||||| | | |||||
Sbjct: 2572 ggaaaaatacataactgagaatagagaagttcagatcaaggtcaggaacagatggaacag 2631
Query: 120 ctgaata----ccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaa 175
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2632 ctgaatatgggccaaacaggatatctgtggtaagcagttcctgccccggctcagggccaa 2691
Query: 176 gaacagatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgc 235
||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 2692 gaacagatggaacagctgaat-atgggccaaacaggatatctgtggtaagcagttcctgc 2750
Query: 236 cccggctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 295
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2751 cccggctcagggccaagaacagatggtccccagatgcggtccagccctcagcagtttcta 2810
Query: 296 gtgaatcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatt 355
| ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 2811 gagaaccatcagatgtttccagggtgccccaaggacctg-aaatgaccctgtgccttatt 2869
Query: 356 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctca 415
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 2870 tgaactaaccaatcagttcgcttctcgcttctgttcgcgcgcttctgctccccgagctca 2929
Query: 416 ataaaagagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccg 475
|||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||
Sbjct: 2930 ataaaagagcccacaacccctcactcggggcgccagtcctccgattgactgagtcgcccg 2989
Query: 476 ggtacccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgtt 535
||||||||| | |||||||| |||||||| | |||||||||| | ||||||||||||||
Sbjct: 2990 ggtacccgtgtatccaataaaccctcttgcag-ttgcatccgacttgtggtctcgctgtt 3048
Query: 536 ccttgggagggtctcctctgagtgattgactaccc-acgacgggggtctttcatttgggg 594
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 3049 ccttgggagggtctcctctgagtgattgactacccgtcagcgggggtctttcatttgggg 3108
Query: 595 gctcgtccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaag 654
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3109 gctcgtccgggatcgggagacccctgcccagggaccaccgacccaccaccgggaggtaag 3168
Query: 655 ctggc 659
|||||
Sbjct: 3169 ctggc 3173
gb|M28247|SYNMMLPLN3 Moloney murine leukemia virus retroviral vector pLNCX, complete
genome.
Length = 6620
Score = 2841 bits (1433), Expect = 0.0
Identities = 1457/1466 (99%), Positives = 1457/1466 (99%), Gaps = 8/1466 (0%)
Query: 1 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tttgaaagaccccacccgtaggtggcaagctagcttaagtaacgccactttgcaaggcat 204
Query: 61 ggaaaaatacataactgagaataggaaagttcagatcaaggtcaggaacaaagaaacagc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaaaaatacataactgagaatagaaaagttcagatcaaggtcaggaacaaagaaacagc 264
Query: 121 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgaataccaaacaggatatctgtggtaagcggttcctgccccggctcagggccaagaaca 324
Query: 181 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatgagacagctgagtgatgggccaaacaggatatctgtggtaagcagttcctgccccgg 384
Query: 241 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctcggggccaagaacagatggtccccagatgcggtccagccctcagcagtttctagtgaa 444
Query: 301 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcatcagatgtttccagggtgccccaaggacctgaaaatgaccctgtaccttatttgaac 504
Query: 361 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaccaatcagttcgcttctcgcttctgttcgcgcgcttccgctctccgagctcaataaa 564
Query: 421 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agagcccacaacccctcactcggcgcgccagtcttccgatagactgcgtcgcccgggtac 624
Query: 481 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccgtattcccaataaagcctcttgctgtttgcatccgaatcgtggtctcgctgttccttg 684
Query: 541 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggagggtctcctctgagtgattgactacccacgacgggggtctttcatttgggggctcgt 744
Query: 601 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ccgggatttggagacccctgcccagggaccaccgacccaccaccgggaggtaagctggcc 804
Query: 661 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agcaacttatctgtgtctgtccgattgtctagtgtctatgtttgatgttatgcgcctgcg 864
Query: 721 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tctgtactagttagctaactagctctgtatctggcggacccgtggtggaactgacgagtt 924
Query: 781 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 ctgaacacccggccgcaaccctgggagacgtcccagggactttgggggccgtttttgtgg 984
Query: 841 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 cccgacctgaggaagggagtcgatgtggaatccgaccccgtcaggatatgtggttctggt 1044
Query: 901 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 aggagacgagaacctaaaacagttcccgcctccgtctgaatttttgctttcggtttggaa 1104
Query: 961 ccgaagccgcgcgtcttgtct--------gctgcagcatcgttctgtgttgtctctgtct 1012
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1105 ccgaagccgcgcgtcttgtctgctgcagcgctgcagcatcgttctgtgttgtctctgtct 1164
Query: 1013 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 gactgtgtttctgtatttgtctgaaaattagggccagactgttaccactcccttaagttt 1224
Query: 1073 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1225 gaccttaggtcactggaaagatgtcgagcggatcgctcacaaccagtcggtagatgtcaa 1284
Query: 1133 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1285 gaagagacgttgggttaccttctgctctgcagaatggccaacctttaacgtcggatggcc 1344
Query: 1193 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1345 gcgagacggcacctttaaccgagacctcatcacccaggttaagatcaaggtcttttcacc 1404
Query: 1253 tggcccgc