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Proteins Selected for Expression and Structure Determination

Explanatory Notes
ProtID aa Org Gene Access# Protein Family Related
Structure		 Functional Annotation
ProDom Distribution
Sim Shr H B A
P001 220 Sce his3 P06633 27 32   B A E IGPD (histidine synthesis)
P002 238 Sce rpe1 P46969 24 26 H B A PDB ribulose-P 3-epimerase
P003 129 Sce hig1 P40037 30 31 H B A PDB,C,A unknown, translation inhibitor?
P004 167 Sce ykl056c P35691 18 18 H       tumor protein homolog
P004a 59-167 Sce                  
P005 368 Sce ygr173w P53295 17 173 H   A C,E unknown, GTP-binding?
P006 108 Sce sui1 P32911 18 22 H B A PDB translation factor SUI1
P006a 20-108 Sce                  
P007 257 Sce ybl036c P38197 19 20 H B   C amino-acid racemase?
P008 228 Sce pdx3 P38075 13 13 H B     pyridoxamine 5P oxidase
P009 211 Sce yer183c P40099 1 19 H       tetrahydrofolate metabolism
P010 307 Sce coq5 P49017 7 237 H B     ubiquinone methlytransferase
P011 322 Sce snf4 P12904 4 168 H     A protein kinase gamma chain
P012 194 Sce skp1 P52286 19 34 H       Skp1 ubiquitin ligase
P012a 1-??? Sce                  
P013 407 Sce ynl181w P53878 1 2 H       steroid oxidoreductase
P014a 124-368 Sce mct1 Q12283             acyl carrier transacylase
P015a 885-935 Sce ycr033w Q02397             C-MYB DNA-binding
P016a 63-182 Sce bms1 Q08965              domain of EF-TU
P017 306 Sce ade1 P27616 17 22 H B A   purine synthesis pathway
P018 291 Sce nit3 P49954 57 77 H B A E UPF0012; nitrilase?
P019 177 Sce ybr022w P38218 1 1 H       unknown
P020 348 Sce hmt1 P38074 4 244 H       hnRNP arg methylase, shP110
P021 437 Sce sup45 P12385 11 23 H   A PDB,E translation release, shP092
P022 436 Sce abd1 P32783 2 4 H       mRNA cap methyltransferase
P023 483 Sce enp1 P38333 3 5 H       essential nuclear protein
P024 322 Sce cdc10 P25342 21 29 H       cell division control protein
P025 327 Sce nop1 P15646 16 16 H   A PDB,B,A,E fibrillarin, snRNP process rRNA
P026 391 Sce gpd1 Q00055 49 52 H B A   glycerol-3P dehydrogenase
P027 417 Sce ydl033c Q12093 20 122 H B     tRNA methyltransferase?
P028 266 Sce prp11 Q07350 2 6 H       pre-mRNA splicing factor
P029 275 Sce yla1 P33399 3 18 H       RNA binding (La autoantigen)
P030 407 Sce qri7 P43122 26 36 H B A   metalloprotease?
P031 428 Sce lys20 P48570 50 76 H B A A homocitrate synthase
P032 525 Sce asf2 P32448 1 2498 H       anti-silencing protein
P033 201 Sce yrb1 P41920 11 21 H     PDB ran-specific GTPase-activating
P034 399 Sce fal1 Q12099 89 733 H B A PDB,B,A,E RNA helicase, process 18S rRNA?
P035 328 Sce hem13 P11353 12 13 H B   B coproporphyrinogen III oxidase
P036 406 Sce rad55 P38953 1 208 H       DNA repair protein RAD55
P037 278 Sce rrp1 P35178 1 6 H       rRNA processing
P038 273 Sce bmh2 P34730 96 1531 H     PDB suppressor of clathrin deficiency
P039 149 Sce btt1 P40314 2 10 H       transcription factor BTF3 family
P040 274 Sce glo2 Q05584 32 90 H B A PDB,E glyoxalase II
P041 493 Sce arh1 P48360 1 11 H     PDB sim human adrenodoxin reductase
P042 493 Sce yel016c P39997 5 24 H B     sim human 5' phosphodiesterase
P043 267 Sce ura3 P03962 31 65 H       orotidine-5'P decarboxylase
P044 387 Sce gly1 P37303 3 645 H       L-threonine aldolase
P045 286 Sce pro3 P32263 24 32 H B A   proline synthesis pathway
P046 184 Sce mxr1 P40029 13 24 H B A B,E methionine sulfoxide reduction
P047 318 Sce prs2 P38620 39 223 H B A PDB,E ribose-P pyrophosphokinase
P048 142 Sce bur6 P40096 1 20 H     PDB sim human NC2alpha repressor
P049 254 Sce sec53 P07283 8 8 H       phosphomannomutase
P050 274 Sce rpn12 P32496 5 5 H       26S proteasome regulation
P051 370 Sce pus2 P53167 1 33 H     E pseudouridine synthase 2
P052 482 Sce srm1 P21827 1 30 H     PDB GDP/GTP exchange factor
P053 400 Sce tad1 P53065 1 18 H       tRNA adenosine deaminase 
P054 361 Sce ufd1 P53044 3 8 H       ubiquitin fusion degradation
P055 287 Sce phb1 P40961 14 70 H       prohibitin, antiproliferative
P056 246 Sce ski6 P46948 6 38 H   A   exoRNase forms 3' end 5.8S rRNA
P057 309 Sce ser2 P42941 1 15 H       phosphoserine phosphatase
P058 493 Sce yhl012w P38709 14 16 H       UDP glucose pyrophosphorylase?
P059 423 Sce yhr033w P38690 2 131         glutamate 5-kinase?
P060 251 Sce fur1 P18562 7 25 H B A PDB,A,E uracil phosphoribosyltransferase
P061 129 Sce yhr162w P38857 8 11 H       UPF0041
P062 174 Sce egd2 P38879 7 13 H     E complex with nascent proteins?
P063 268 Sce rpn10 P38886 2 11 H       26S proteasome regulation
P064 341 Sce yhr210c P38893 10 13 H B     UDP-glucose-4-epimerase?
P065 394 Sce yil042c P40530 19 21 H       sim mammalian histidine kinases
P066 460 Sce dal1 P32375 42 83 H B A E allantoinase
P067 161 Sce yjl011c P47076 1 1 H       unknown
P068 299 Sce yjl068c P40363 9 29 H B     similar to human esterase D
P069 279 Sce asf1 P32447 1 1439 H     PDB anti-silencing protein
P070 380 Sce glg2 P47011 5 13 H       initiator of glycogen synthesis
P071 177 Sce bna1 P47096 1 4 H       nicotinic acid synthesis pathway
P072 453 Sce yjr078w P47125 7 7 H       indoleamine 2,3-dioxygenase?
P073 202 Sce met14 Q02196 9 32 H B A PDB synthesis of activated sulfate
P074 151 Sce ykl002w P36108 6 7 H       unknown
P075 278 Sce yju2 P28320 1 6 H       nuclear hydrophilic protein
P076 382 Sce rad27 P26793 22 72 H B A PDB,B,A,E ssDNA endo & 5'exo at nicks
P077 337 Sce ykl151c P36059 5 17 H B   A UPF0031
P078 466 Sce spe1 P08432 50 72 H B A PDB ornithine decarboxylase
P079 320 Sce mtd1 Q02046 30 38 H B   PDB tetrahydrofolate metabolism
P080 250 Sce ylr022c Q07953 7 7 H   A E UPF0023, hydrophilic
P081 483 Sce cbf5 P33322 10 2558 H     B,E rRNA pseuduridine synthase?
P082 328 Sce ylr239c Q06005 2 13 H       lipoate-protein ligase B
P083 376 Sce ogg1 P53397 1 5 H     PDB 8-oxoguanine DNA glycosylase
P084 210 Sce rad10 P06838 1 6 H       DNA repair complex, incision?
P085 491 Sce hmgs P54839 14 207 H     E HMG-CoA synthase
P086 156 Sce ymr002w Q03667 2 2 H       unknown
P087 249 Sce lys7 P40202 1 2 H       homocitrate dehydratase?
P088 145 Sce ymr074c Q04773 8 8 H   A   unknown
P089 284 Sce ymr087w Q04299 1 1 H       unknown
P090 274 Sce ymr178w Q03219 1 59 H       unknown
P091 464 Sce ymr293c Q03557 35 69 H B A E monocarboxylic acid amidase?
P092 386 Sce dom34 P33309 5 24 H     E translation? shP021
P093 456 Sce ynl040w P53960 1 53 H       alanyl-tRNA synthetase?
P094 226 Sce ynl107w P53930 4 10 H       transcriptional activator?
P095 240 Sce ynl129w P53915 1 28 H       ATP binding; uridine kinase?
P096 259 Sce ynl168c P53889 17 29 H B A   degrades aromatic compounds?
P097 246 Sce ynl200c P40165 2 14 H     A sugar nucleotidyl transferase? 
P098 433 Sce rpd3 P32561 26 53 H     PDB histone deacetylase
P099 317 Sce ynr027w P53727 14 109 H B     pyridoxal kinase?
P100 396 Sce mvd1 P32377 6 6 H B     mevalonate PP decarboxylase
P101 367 Sce yol010w Q08096 12 12 H B A PDB RNA 3'P cyclase?
P102 491 Sce gsh2 Q08220 10 10 H     PDB glutathione synthetase
P103 396 Sce spe2 P21182 31 31 H     PDB S-AdoMet decarboxylase
P104 420 Sce arg1 P22768 22 22 H B A   argininosuccinate synthase
P105 434 Sce hes1 P35843 8 20         involved in ergosterol synthesis
P106 275 Sce hem4 P06174 5 5         uroporphyrinogen III synthase
P107 150 Sce grx5 Q02784 8 17   B   PDB UPF0055
P108 456 Sce ypl095c Q02891 3 10         UPF0017
P109 288 Sce idi1 P15496 20 22   B     isopentenyl-di-P isomerase
P110 318 Sce dim1 P41819 71 83   B A PDB,B,E rRNA adenine methylase shP020
P111 245 Sce tif6 Q12522 11 11     A   eIF-6 translation initiation factor
P111a 1-224 Sce                  
P111-1 228 Mja eif6 Q60357 11 11     A   eIF-6 translation initiation factor
P112 405 Sce tif5 P38431 7 20       A,E eIF-5 translation initiation factor
P113 176 Sce mak3 Q03503 2 259         protein N-acetyltransferase
P114 185 Sce isa2 Q12425 29 36   B   J,C,E possible nitrogen fixation?
P115 293 Sce spe3 Q12074 27 36   B A   spermidine synthase
P116 157 Sce nut2 Q06213 3 3         represses HO endonuclease
P117 357 Sce hst2 P53686 1 28       A histone deacetylase
P118 130 Sce yjr114w P32787 2 3         mitochondrial genome maintenance

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