Contents

  • Techniques for using the PE effectively.
  • Building Presentations with PE.
  • Tutorial: Learn how to use the PE!.
     

  • Techniques for using the Protein Explorer (PE) Effectively.

    Building Presentations with PE

    The simplest method for building a linear presentation with Chime is explained in detail in , where a downloadable template is provided.

    It is also possible to save the scripts with the PE. After you have obtained the desired image, use Chime's menu: Edit, Copy Chime Script. This copies the script into the clipboard. Now paste the script from the clipboard into a text editor (Windows: Wordpad; Macintosh: Word), and save it to a filename ending in .spt. Be sure to save it as plain MS-DOS/ASCII text.

    There are some advantages to saving scripts with Chime instead of with RasMol. These are described in Shortening Scripts Saved from RasMol or Chime.

    Scripts saved from either RasMol or Chime are often unnecessarily long and slow to execute, although they produce the desired image. It is fairly simple to shorten these scripts dramatically.

    (Chime-generated scripts will run in RasMol as well as Chime. They contain a few commands not recognized by RasMol, but these simply generate harmless error messages in RasMol.)


    Protein Explorer Tutorial

    Sorry, the tutorial has not yet been written.