ORF Finder (Open Reading Frame Finder)

PubMed Entrez BLAST OMIM Taxonomy Structure

gi|16127994:2855116-2857677 SOURCE Escherichia coli K12.

Program Database with parameters









Length: 853 aa

      1 atgagtgcaatagaaaatttcgacgcccatacgcccatgatgcag
        M  S  A  I  E  N  F  D  A  H  T  P  M  M  Q 
     46 cagtatctcaggctgaaagcccagcatcccgagatcctgctgttt
        Q  Y  L  R  L  K  A  Q  H  P  E  I  L  L  F 
     91 taccggatgggtgatttttatgaactgttttatgacgacgcaaaa
        Y  R  M  G  D  F  Y  E  L  F  Y  D  D  A  K 
    136 cgcgcgtcgcaactgctggatatttcactgaccaaacgcggtgct
        R  A  S  Q  L  L  D  I  S  L  T  K  R  G  A 
    181 tcggcgggagagccgatcccgatggcggggattccctaccatgcg
        S  A  G  E  P  I  P  M  A  G  I  P  Y  H  A 
    226 gtggaaaactatctcgccaaactggtgaatcagggagagtccgtt
        V  E  N  Y  L  A  K  L  V  N  Q  G  E  S  V 
    271 gccatctgcgaacaaattggcgatccggcgaccagcaaaggtccg
        A  I  C  E  Q  I  G  D  P  A  T  S  K  G  P 
    316 gttgagcgcaaagttgtgcgtatcgttacgccaggcaccatcagc
        V  E  R  K  V  V  R  I  V  T  P  G  T  I  S 
    361 gatgaagccctgttgcaggagcgtcaggacaacctgctggcggct
        D  E  A  L  L  Q  E  R  Q  D  N  L  L  A  A 
    406 atctggcaggacagcaaaggtttcggctacgcgacgctggatatc
        I  W  Q  D  S  K  G  F  G  Y  A  T  L  D  I 
    451 agttccgggcgttttcgcctgagcgaaccggctgaccgcgaaacg
        S  S  G  R  F  R  L  S  E  P  A  D  R  E  T 
    496 atggcggcagaactgcaacgcactaatcctgcggaactgctgtat
        M  A  A  E  L  Q  R  T  N  P  A  E  L  L  Y 
    541 gcagaagattttgctgaaatgtcgttaattgaaggccgtcgcggc
        A  E  D  F  A  E  M  S  L  I  E  G  R  R  G 
    586 ctgcgccgtcgcccgctgtgggagtttgaaatcgacaccgcgcgc
        L  R  R  R  P  L  W  E  F  E  I  D  T  A  R 
    631 cagcagttgaatctgcaatttgggacccgcgatctggtcggtttt
        Q  Q  L  N  L  Q  F  G  T  R  D  L  V  G  F 
    676 ggcgtcgagaacgcgccgcgcggactttgtgctgccggttgtctg
        G  V  E  N  A  P  R  G  L  C  A  A  G  C  L 
    721 ttgcagtatgcgaaagatacccaacgtacgactctgccgcatatt
        L  Q  Y  A  K  D  T  Q  R  T  T  L  P  H  I 
    766 cgttccatcaccatggaacgtgagcaggacagcatcattatggat
        R  S  I  T  M  E  R  E  Q  D  S  I  I  M  D 
    811 gccgcgacgcgtcgtaatctggaaatcacccagaacctggcgggt
        A  A  T  R  R  N  L  E  I  T  Q  N  L  A  G 
    856 ggtgcggaaaatacgctggcttctgtgctcgactgcaccgtcacg
        G  A  E  N  T  L  A  S  V  L  D  C  T  V  T 
    901 ccgatgggcagccgtatgctgaaacgctggctgcatatgccagtg
        P  M  G  S  R  M  L  K  R  W  L  H  M  P  V 
    946 cgcgatacccgcgtgttgcttgagcgccagcaaactattggcgca
        R  D  T  R  V  L  L  E  R  Q  Q  T  I  G  A 
    991 ttgcaggatttcaccgccgggctacagccggtactgcgtcaggtc
        L  Q  D  F  T  A  G  L  Q  P  V  L  R  Q  V 
   1036 ggcgacctggaacgtattctggcacgtctggctttacgaactgct
        G  D  L  E  R  I  L  A  R  L  A  L  R  T  A 
   1081 cgcccacgcgatctggcccgtatgcgccacgctttccagcaactg
        R  P  R  D  L  A  R  M  R  H  A  F  Q  Q  L 
   1126 ccggagctgcgtgcgcagttagaaactgtcgatagtgcaccggta
        P  E  L  R  A  Q  L  E  T  V  D  S  A  P  V 
   1171 caggcgctacgtgagaagatgggcgagtttgccgagctgcgcgat
        Q  A  L  R  E  K  M  G  E  F  A  E  L  R  D 
   1216 ctgctggagcgagcaatcatcgacacaccgccggtgctggtacgc
        L  L  E  R  A  I  I  D  T  P  P  V  L  V  R 
   1261 gacggtggtgttatcgcatcgggctataacgaagagctggatgag
        D  G  G  V  I  A  S  G  Y  N  E  E  L  D  E 
   1306 tggcgcgcgctggctgacggcgcgaccgattatctggagcgtctg
        W  R  A  L  A  D  G  A  T  D  Y  L  E  R  L 
   1351 gaagtccgcgagcgtgaacgtaccggcctggacacgctgaaagtt
        E  V  R  E  R  E  R  T  G  L  D  T  L  K  V 
   1396 ggctttaatgcggtgcacggctactacattcaaatcagccgtggg
        G  F  N  A  V  H  G  Y  Y  I  Q  I  S  R  G 
   1441 caaagccatctggcacccatcaactacatgcgtcgccagacgctg
        Q  S  H  L  A  P  I  N  Y  M  R  R  Q  T  L 
   1486 aaaaacgccgagcgctacatcattccagagctaaaagagtacgaa
        K  N  A  E  R  Y  I  I  P  E  L  K  E  Y  E 
   1531 gataaagttctcacctcaaaaggcaaagcactggcactggaaaaa
        D  K  V  L  T  S  K  G  K  A  L  A  L  E  K 
   1576 cagctttatgaagagctgttcgacctgctgttgccgcatctggaa
        Q  L  Y  E  E  L  F  D  L  L  L  P  H  L  E 
   1621 gcgttgcaacagagcgcgagcgcgctggcggaactcgacgtgctg
        A  L  Q  Q  S  A  S  A  L  A  E  L  D  V  L 
   1666 gttaacctggcggaacgggcctataccctgaactacacctgcccg
        V  N  L  A  E  R  A  Y  T  L  N  Y  T  C  P 
   1711 accttcattgataaaccgggcattcgcattaccgaaggtcgccat
        T  F  I  D  K  P  G  I  R  I  T  E  G  R  H 
   1756 ccggtagttgaacaagtactgaatgagccatttatcgccaacccg
        P  V  V  E  Q  V  L  N  E  P  F  I  A  N  P 
   1801 ctgaatctgtcgccgcagcgccgcatgttgatcatcaccggtccg
        L  N  L  S  P  Q  R  R  M  L  I  I  T  G  P 
   1846 aacatgggcggtaaaagtacctatatgcgccagaccgcactgatt
        N  M  G  G  K  S  T  Y  M  R  Q  T  A  L  I 
   1891 gcgctgatggcctacatcggcagctatgtaccggcacaaaaagtc
        A  L  M  A  Y  I  G  S  Y  V  P  A  Q  K  V 
   1936 gagattggacctatcgatcgcatctttacccgcgtaggcgcggca
        E  I  G  P  I  D  R  I  F  T  R  V  G  A  A 
   1981 gatgacctggcgtccgggcgctcaacctttatggtggagatgact
        D  D  L  A  S  G  R  S  T  F  M  V  E  M  T 
   2026 gaaaccgccaatattttacataacgccaccgaatacagtctggtg
        E  T  A  N  I  L  H  N  A  T  E  Y  S  L  V 
   2071 ttaatggatgagatcgggcgtggaacgtccacctacgatggtctg
        L  M  D  E  I  G  R  G  T  S  T  Y  D  G  L 
   2116 tcgctggcgtgggcgtgcgcggaaaatctggcgaataagattaag
        S  L  A  W  A  C  A  E  N  L  A  N  K  I  K 
   2161 gcattgacgttatttgctacccactatttcgagctgacccagtta
        A  L  T  L  F  A  T  H  Y  F  E  L  T  Q  L 
   2206 ccggagaaaatggaaggcgtcgctaacgtgcatctcgatgcactg
        P  E  K  M  E  G  V  A  N  V  H  L  D  A  L 
   2251 gagcacggcgacaccattgcctttatgcacagcgtgcaggatggc
        E  H  G  D  T  I  A  F  M  H  S  V  Q  D  G 
   2296 gcggcgagcaaaagctacggcctggcggttgcagctctggcaggc
        A  A  S  K  S  Y  G  L  A  V  A  A  L  A  G 
   2341 gtgccaaaagaggttattaagcgcgcacggcaaaagctgcgtgag
        V  P  K  E  V  I  K  R  A  R  Q  K  L  R  E 
   2386 ctggaaagcatttcgccgaacgccgccgctacgcaagtggatggt
        L  E  S  I  S  P  N  A  A  A  T  Q  V  D  G 
   2431 acgcaaatgtctttgctgtcagtaccagaagaaacttcgcctgcg
        T  Q  M  S  L  L  S  V  P  E  E  T  S  P  A 
   2476 gtcgaagctctggaaaatcttgatccggattcactcaccccgcgt
        V  E  A  L  E  N  L  D  P  D  S  L  T  P  R 
   2521 caggcgctggagtggatttatcgcttgaagagcctggtgtaa 2562   
        Q  A  L  E  W  I  Y  R  L  K  S  L  V  * 
FramefromtoLength
+1   1..
25612562
-1   565..936372
-2   432..803372
+2   2243..2548306
-1   1177..1449273
-1   1546..1755210
-2   1029..1235207
+2   728..922195
-2   1698..1850153
-1   1..147147
+2   1583..1696114
+2   362..472111
-2   255..356102
+3   3..104102