Biologically significant sites or patterns


protein sequence:

 
 MLECNELIPL FYETCPAGEN ICYEMFMVAT PKVPCERGCI DVCPESSLIV KYVCCNTDRC Q

Access#     From->To    Name                    Doc#
_______     ________    ____________________    _________
PS00005     30->33      PKC_PHOSPHO_SITE        PDOC00005
PS00005     57->60      PKC_PHOSPHO_SITE        PDOC00005
PS00272     38->59      SNAKE_TOXIN             PDOC00245


1 PDOC00005 PS00005  PKC_PHOSPHO_SITE
Protein kinase C phosphorylation site 

Number of matches: 2
      1      30-32 TPK                                                         
      2      57-59 TDR                                                         


2 PDOC00245 PS00272  SNAKE_TOXIN
Snake toxins signature

             38-58 GCIDVCPESSLIVKYVCCNTD






Enzyme Digestion


All cysteines in reduced form.

Methionines have not been oxidized.

Displaying peptides with a mass bigger than 500 Dalton.


The selected enzyme is: Trypsin

The peptide masses from your sequence are:

[Theoretical pI/Mw: 4.29 / 6917.05]

 mass       position  peptide sequence
 ---------- --------- ----------------

 3701.37      1-  32  MLECNELIPLFYETCPAGENICYEMFMVATPK
  602.71     33-  37  VPCER
 1462.74     38-  51  GCIDVCPESSLIVK
  973.09     52-  59  YVCCNTDR



The selected enzyme is: Glu C (phosphate)

The peptide masses from your sequence are:

[Theoretical pI/Mw: 4.29 / 6917.05]

 mass       position  peptide sequence
 ---------- --------- ----------------

  894.08      7-  13  LIPLFYE
  576.62     14-  19  TCPAGE
  640.71     20-  24  NICYE
 1352.69     25-  36  MFMVATPKVPCE
  562.64     37-  41  RGCID
 1444.68     46-  58  SSLIVKYVCCNTD



The selected enzyme is: Glu C (bicarbonate )

The peptide masses from your sequence are:

[Theoretical pI/Mw: 4.29 / 6917.05]

 mass       position  peptide sequence
 ---------- --------- ----------------

  894.08      7-  13  LIPLFYE
  576.62     14-  19  TCPAGE
  640.71     20-  24  NICYE
 1352.69     25-  36  MFMVATPKVPCE
  991.15     37-  45  RGCIDVCPE
 1832.14     46-  61  SSLIVKYVCCNTDRCQ






Molecule Weight



 
 name    #        wt      vol       vbar    mol%     wt%    vol%   vbar%

  ala    2     142.16    177.20      1.50    3.28    2.06    2.14    3.41
  cys    9     928.26    976.50      5.68   14.75   13.45   11.81   12.95
  asp    2     230.18    222.20      1.16    3.28    3.34    2.69    2.64
  glu    7     903.84    968.80      4.50   11.48   13.10   11.72   10.27
  phe    2     294.36    379.80      1.55    3.28    4.27    4.59    3.53
  gly    2     114.12    120.20      1.26    3.28    1.65    1.45    2.88
  his    0       0.00      0.00      0.00    0.00    0.00    0.00    0.00
  ile    4     452.68    666.80      3.54    6.56    6.56    8.06    8.06
  lys    2     256.36    337.20      1.58    3.28    3.72    4.08    3.60
  leu    4     452.68    666.80      3.54    6.56    6.56    8.06    8.06
  met    3     393.63    488.70      2.24    4.92    5.71    5.91    5.10
  asn    3     342.33    353.10      1.86    4.92    4.96    4.27    4.24
  pro    5     485.60    613.50      3.79    8.20    7.04    7.42    8.64
  gln    1     128.14    143.90      0.67    1.64    1.86    1.74    1.54
  arg    2     312.40    346.80      1.33    3.28    4.53    4.19    3.04
  ser    2     174.16    178.00      1.23    3.28    2.52    2.15    2.80
  thr    3     303.33    348.30      2.07    4.92    4.40    4.21    4.71
  val    5     495.70    700.00      4.24    8.20    7.18    8.47    9.66
  trp    0       0.00      0.00      0.00    0.00    0.00    0.00    0.00
  tyr    3     489.54    580.80      2.14    4.92    7.10    7.02    4.87
  tot   61    6899.47   8268.60     43.85  100.00  100.00  100.00  100.00
  ala    2     142.16    177.20      1.50    3.28    2.06    2.14    3.41
  cys    9     928.26    976.50      5.68   14.75   13.45   11.81   12.95
  asp    2     230.18    222.20      1.16    3.28    3.34    2.69    2.64
  glu    7    903.84    968.80      4.50   11.48   13.10   11.72   10.27
  phe    2     294.36    379.80      1.55    3.28    4.27    4.59    3.53
  gly    2     114.12    120.20      1.26    3.28    1.65    1.45    2.88
  his    0       0.00      0.00      0.00    0.00    0.00    0.00    0.00
  ile    4     452.68    666.80      3.54    6.56    6.56    8.06    8.06
  lys    2     256.36    337.20      1.58    3.28    3.72    4.08    3.60
  leu    4     452.68    666.80      3.54    6.56    6.56    8.06    8.06
  met    3     393.63    488.70      2.24    4.92    5.71    5.91    5.10
  asn    3     342.33    353.10      1.86    4.92    4.96    4.27    4.24
  pro    5     485.60    613.50      3.79    8.20    7.04    7.42    8.64
  gln    1     128.14    143.90      0.67    1.64    1.86    1.74    1.54
  arg    2     312.40    346.80      1.33    3.28    4.53    4.19    3.04
  ser    2     174.16    178.00      1.23    3.28    2.52    2.15    2.80
  thr    3     303.33    348.30      2.07    4.92    4.40    4.21    4.71
  val    5     495.70    700.00      4.24    8.20    7.18    8.47    9.66
  trp    0       0.00      0.00      0.00    0.00    0.00    0.00    0.00
  tyr    3     489.54    580.80      2.14    4.92    7.10    7.02    4.87
  tot   61    6899.47   8268.60     43.85  100.00  100.00  100.00  100.00
  



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