Research Proposal
 

The Albert Einstein College of Medicine, the Department of Biology at Brookhaven National Laboratory, Mount Sinai School of Medicine, the Rockefeller University, and the Weill Medical College of Cornell University have formed the New York Structural Genomics Research Consortium (NYSGRC) for high-throughput, structural and functional studies of proteins.

The research program takes the form of a Pilot Study focused on establishing a fully integrated, high-throughput system for protein family classification and target selection, target protein expression, purification, biophysical characterization and crystallization, target protein structure determination by X-ray crystallography, and analyses and dissemination of the results.

The long-term goal of the NYSGRC is to determine the 10,000 plus three-dimensional protein structures envisaged by the National Institute of General Medical Sciences Protein Structure Initiative.

The specific aims are:
 
 

Identify target protein sequences for structural genomics
Develop high-throughput E.coli expression of soluble target proteins
Develop high-throughput production of target proteins
Develop high-throughput biophysical characterization of target proteins
Develop high-throughput crystallization of target proteins
Develop efficient experimental strategies for MAD crystallography
Develop high-throughput synchrotron data collection with target protein crystals
Develop and use an Internet-based computational pipeline for protein crystallography
Develop high-throughput molecular replacement tools for crystallography
Develop high-throughput comparative modeling for structural genomics
Develop efficient annotation and dissemination of protein structures and models
Develop an Internet-based "web-book" for use by the NYSGRC

 
 
 
 
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